Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 IFIT1P1-201ENST00000400497 1449 ntBASIC9.88□□□□□ -0.83
VPS8Q8N3P4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 SNORA43.1-201ENST00000364863 140 ntBASIC9.88□□□□□ -0.83
VPS8Q8N3P4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 AC009500.1-201ENST00000420684 583 ntBASIC9.88□□□□□ -0.83
VPS8Q8N3P4 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 AC068768.2-201ENST00000602352 343 ntBASIC9.88□□□□□ -0.83
VPS8Q8N3P4 AC004801.6-201ENST00000616571 978 ntBASIC9.88□□□□□ -0.83
VPS8Q8N3P4 MIR6071-201ENST00000616741 78 ntBASIC9.88□□□□□ -0.83
VPS8Q8N3P4 AC073592.6-201ENST00000624271 415 ntBASIC9.88□□□□□ -0.83
VPS8Q8N3P4 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS8Q8N3P4 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 LPP-208ENST00000448637 5835 ntTSL 5 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 SNORA51.9-201ENST00000384295 124 ntBASIC9.87□□□□□ -0.83
VPS8Q8N3P4 RNU11-6P-201ENST00000391127 133 ntBASIC9.87□□□□□ -0.83
VPS8Q8N3P4 AC002553.3-201ENST00000453002 341 ntBASIC9.87□□□□□ -0.83
VPS8Q8N3P4 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 RPL34P33-201ENST00000486062 334 ntBASIC9.87□□□□□ -0.83
VPS8Q8N3P4 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 RN7SKP98-201ENST00000517070 156 ntBASIC9.87□□□□□ -0.83
VPS8Q8N3P4 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 AC090888.3-201ENST00000558917 509 ntBASIC9.87□□□□□ -0.83
VPS8Q8N3P4 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 MRPS21P8-201ENST00000569196 235 ntBASIC9.87□□□□□ -0.83
VPS8Q8N3P4 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC9.87□□□□□ -0.83
VPS8Q8N3P4 AL512652.1-201ENST00000619006 500 ntBASIC9.87□□□□□ -0.83
VPS8Q8N3P4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 AL157831.2-201ENST00000564681 3095 ntBASIC9.87□□□□□ -0.83
VPS8Q8N3P4 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
VPS8Q8N3P4 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 FTO-215ENST00000636491 1676 ntTSL 5 BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 FAM32BP-201ENST00000344033 333 ntBASIC9.86□□□□□ -0.83
VPS8Q8N3P4 VN1R12P-201ENST00000403778 876 ntBASIC9.86□□□□□ -0.83
VPS8Q8N3P4 SNORA11.3-201ENST00000408471 128 ntBASIC9.86□□□□□ -0.83
VPS8Q8N3P4 RN7SKP161-201ENST00000411110 305 ntBASIC9.86□□□□□ -0.83
VPS8Q8N3P4 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 MORF4-201ENST00000447135 971 ntBASIC9.86□□□□□ -0.83
VPS8Q8N3P4 AP002453.1-201ENST00000492327 668 ntBASIC9.86□□□□□ -0.83
VPS8Q8N3P4 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 AL845552.1-201ENST00000556820 323 ntBASIC9.86□□□□□ -0.83
VPS8Q8N3P4 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 AC002310.3-201ENST00000569728 723 ntBASIC9.86□□□□□ -0.83
VPS8Q8N3P4 MIR4502-201ENST00000580432 81 ntBASIC9.86□□□□□ -0.83
VPS8Q8N3P4 SNORA11.6-201ENST00000619030 128 ntBASIC9.86□□□□□ -0.83
VPS8Q8N3P4 MIR1910-201ENST00000636955 80 ntBASIC9.86□□□□□ -0.83
VPS8Q8N3P4 CAST-222ENST00000508579 1758 ntTSL 2 BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 EIF3EP1-201ENST00000433978 1316 ntBASIC9.86□□□□□ -0.83
VPS8Q8N3P4 AC092692.1-201ENST00000623625 2595 ntBASIC9.86□□□□□ -0.83
VPS8Q8N3P4 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
VPS8Q8N3P4 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 AC105749.1-201ENST00000631338 2008 ntBASIC9.85□□□□□ -0.83
VPS8Q8N3P4 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms