Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRIM48Q8IWZ4 AC092821.2-201ENST00000545710 2042 ntBASIC7□□□□□ -1.29
TRIM48Q8IWZ4 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 HCG18-244ENST00000602516 2890 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 GAPDHP15-201ENST00000398586 975 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 LRRC37BP1-201ENST00000398851 714 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 RN7SKP85-201ENST00000411349 318 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 PTP4A1P7-201ENST00000423476 514 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 RPL5P4-201ENST00000434805 886 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 PHB2P1-201ENST00000434943 890 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 RPL21P33-201ENST00000444831 484 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 SRP68P2-201ENST00000456184 254 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 RPLP0P1-201ENST00000457002 361 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC117395.2-201ENST00000463122 1128 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 MTCO3P35-201ENST00000485582 781 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 OR2A3P-201ENST00000493774 953 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 SSX8-201ENST00000506270 579 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 RNU6-311P-201ENST00000516224 102 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC010476.1-201ENST00000519111 851 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 HMGB1P46-201ENST00000520062 610 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC092868.3-201ENST00000560515 784 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 EEF1B2P1-201ENST00000567221 672 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 SETP3-201ENST00000581726 813 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 MIR5010-201ENST00000582846 120 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC113368.1-201ENST00000603736 382 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC002487.1-201ENST00000604565 994 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 HMGB1P51-201ENST00000605166 638 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC122710.3-201ENST00000606566 541 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 MIR665-201ENST00000635949 72 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 AC018717.1-201ENST00000457712 1505 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 FADS2P1-201ENST00000611807 1446 ntBASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TRIM48Q8IWZ4 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 AC005614.1-201ENST00000598952 3653 ntBASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 MIR152-201ENST00000385212 87 ntBASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 RNA5SP53-201ENST00000391299 120 ntBASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 CNN3P1-201ENST00000401596 935 ntBASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.98□□□□□ -1.29
TRIM48Q8IWZ4 MTATP6P20-201ENST00000414147 562 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms