Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 RPL35AP24-201ENST00000413846 330 ntBASIC5.01□□□□□ -1.61
VPS13CQ709C8 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 MORF4-201ENST00000447135 971 ntBASIC5.01□□□□□ -1.61
VPS13CQ709C8 SNORA58-201ENST00000505219 137 ntBASIC5.01□□□□□ -1.61
VPS13CQ709C8 GAPDHP71-201ENST00000511530 1003 ntBASIC5.01□□□□□ -1.61
VPS13CQ709C8 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.01□□□□□ -1.61
VPS13CQ709C8 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 ICOSLG-204ENST00000407780 7080 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 ACAN-208ENST00000561243 7593 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 ZNF442-201ENST00000242804 6219 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 ITGA10-204ENST00000539363 4735 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 MYH10-201ENST00000269243 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 MYH10-203ENST00000379980 7694 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 OR2W4P-201ENST00000406496 926 ntBASIC5.01□□□□□ -1.61
VPS13CQ709C8 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 RANP1-206ENST00000455094 651 ntBASIC5.01□□□□□ -1.61
VPS13CQ709C8 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 PPIP5K1-207ENST00000396923 5636 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 FP325330.2-201ENST00000624219 5630 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 TMEM108-211ENST00000515826 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC5□□□□□ -1.61
VPS13CQ709C8 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5□□□□□ -1.61
VPS13CQ709C8 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
VPS13CQ709C8 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5□□□□□ -1.61
VPS13CQ709C8 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5□□□□□ -1.61
VPS13CQ709C8 AL445928.1-201ENST00000435545 222 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 AC138866.2-201ENST00000508650 584 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 AC087360.1-201ENST00000518788 616 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5□□□□□ -1.61
VPS13CQ709C8 MIR4776-2-201ENST00000580204 80 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 AP000550.3-201ENST00000637734 379 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 MAST4-201ENST00000261569 7664 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
VPS13CQ709C8 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5□□□□□ -1.61
VPS13CQ709C8 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC5□□□□□ -1.61
VPS13CQ709C8 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
VPS13CQ709C8 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 CYP4Z2P-201ENST00000423332 1512 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 LMO7-201ENST00000321797 5647 ntTSL 5 BASIC5□□□□□ -1.61
VPS13CQ709C8 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
VPS13CQ709C8 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 PTPRK-221ENST00000532331 5757 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 USP48-203ENST00000374732 3037 ntTSL 2 BASIC5□□□□□ -1.61
VPS13CQ709C8 DDX25-201ENST00000263576 7555 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
VPS13CQ709C8 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 ZAN-205ENST00000613979 8669 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 RNU1-106P-201ENST00000384382 164 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 AC005042.1-201ENST00000393397 800 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 RPS4XP1-201ENST00000482189 787 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 AC117395.1-201ENST00000487390 403 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC5□□□□□ -1.61
VPS13CQ709C8 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5□□□□□ -1.61
VPS13CQ709C8 AL512329.2-201ENST00000607350 548 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5□□□□□ -1.61
VPS13CQ709C8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC5□□□□□ -1.61
VPS13CQ709C8 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
VPS13CQ709C8 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 N6AMT1-201ENST00000303775 4865 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 RAB3GAP1-201ENST00000264158 4914 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS13CQ709C8 AL096829.1-201ENST00000413677 457 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5□□□□□ -1.61
VPS13CQ709C8 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5□□□□□ -1.61
VPS13CQ709C8 AC113412.1-201ENST00000425840 504 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5□□□□□ -1.61
VPS13CQ709C8 UGT2B25P-201ENST00000511504 1586 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 AC021146.10-201ENST00000515628 706 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5□□□□□ -1.61
VPS13CQ709C8 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5□□□□□ -1.61
VPS13CQ709C8 OR7A1P-201ENST00000601206 970 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 SUGT1P3-202ENST00000604259 383 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 IGLCOR22-2-201ENST00000605398 313 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 Mico1.1-201ENST00000611698 204 ntBASIC5□□□□□ -1.61
VPS13CQ709C8 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5□□□□□ -1.61
VPS13CQ709C8 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 FHL2-207ENST00000409177 4881 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms