Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SEC61A1P61619 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC5.87□□□□□ -1.47
SEC61A1P61619 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SEC61A1P61619 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SEC61A1P61619 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC5.87□□□□□ -1.47
SEC61A1P61619 AP003170.5-201ENST00000397185 335 ntBASIC5.87□□□□□ -1.47
SEC61A1P61619 RNU2-72P-201ENST00000411175 163 ntBASIC5.87□□□□□ -1.47
SEC61A1P61619 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.87□□□□□ -1.47
SEC61A1P61619 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.87□□□□□ -1.47
SEC61A1P61619 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.87□□□□□ -1.47
SEC61A1P61619 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.87□□□□□ -1.47
SEC61A1P61619 RNU6-467P-201ENST00000517027 110 ntBASIC5.87□□□□□ -1.47
SEC61A1P61619 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.87□□□□□ -1.47
SEC61A1P61619 AC026688.1-201ENST00000520639 1168 ntBASIC5.87□□□□□ -1.47
SEC61A1P61619 KCTD9P4-201ENST00000526766 1166 ntBASIC5.87□□□□□ -1.47
SEC61A1P61619 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.87□□□□□ -1.47
SEC61A1P61619 OR4A21P-201ENST00000532759 944 ntBASIC5.87□□□□□ -1.47
SEC61A1P61619 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.87□□□□□ -1.47
SEC61A1P61619 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.87□□□□□ -1.47
SEC61A1P61619 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.87□□□□□ -1.47
SEC61A1P61619 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
SEC61A1P61619 AP000919.1-201ENST00000582850 985 ntBASIC5.87□□□□□ -1.47
SEC61A1P61619 WDR45BP1-201ENST00000583470 1029 ntBASIC5.87□□□□□ -1.47
SEC61A1P61619 AC087468.1-201ENST00000604365 630 ntBASIC5.87□□□□□ -1.47
SEC61A1P61619 AC138473.1-201ENST00000605717 526 ntBASIC5.87□□□□□ -1.47
SEC61A1P61619 AL355816.2-201ENST00000610049 647 ntBASIC5.87□□□□□ -1.47
SEC61A1P61619 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.87□□□□□ -1.47
SEC61A1P61619 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 AC005753.1-201ENST00000623837 618 ntBASIC5.87□□□□□ -1.47
SEC61A1P61619 AP003400.2-201ENST00000624036 666 ntBASIC5.87□□□□□ -1.47
SEC61A1P61619 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.87□□□□□ -1.47
SEC61A1P61619 MIR665-201ENST00000635949 72 ntBASIC5.87□□□□□ -1.47
SEC61A1P61619 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.87□□□□□ -1.47
SEC61A1P61619 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC5.87□□□□□ -1.47
SEC61A1P61619 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC5.87□□□□□ -1.47
SEC61A1P61619 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC5.87□□□□□ -1.47
SEC61A1P61619 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 HSPD1P1-201ENST00000503199 1726 ntBASIC5.87□□□□□ -1.47
SEC61A1P61619 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.87□□□□□ -1.47
SEC61A1P61619 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.87□□□□□ -1.47
SEC61A1P61619 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SEC61A1P61619 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SEC61A1P61619 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SEC61A1P61619 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SEC61A1P61619 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.86□□□□□ -1.47
SEC61A1P61619 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SEC61A1P61619 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SEC61A1P61619 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SEC61A1P61619 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
SEC61A1P61619 AC006511.3-201ENST00000624929 1783 ntBASIC5.86□□□□□ -1.47
SEC61A1P61619 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.86□□□□□ -1.47
SEC61A1P61619 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SEC61A1P61619 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SEC61A1P61619 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SEC61A1P61619 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.86□□□□□ -1.47
SEC61A1P61619 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SEC61A1P61619 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SEC61A1P61619 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.86□□□□□ -1.47
SEC61A1P61619 AC106901.1-201ENST00000425086 698 ntBASIC5.86□□□□□ -1.47
SEC61A1P61619 CHCHD3P1-201ENST00000425516 676 ntBASIC5.86□□□□□ -1.47
SEC61A1P61619 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.86□□□□□ -1.47
SEC61A1P61619 BX119904.3-201ENST00000428194 957 ntBASIC5.86□□□□□ -1.47
SEC61A1P61619 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SEC61A1P61619 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.86□□□□□ -1.47
SEC61A1P61619 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.86□□□□□ -1.47
SEC61A1P61619 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.86□□□□□ -1.47
SEC61A1P61619 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.86□□□□□ -1.47
SEC61A1P61619 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.86□□□□□ -1.47
SEC61A1P61619 OR51P1P-201ENST00000447547 942 ntBASIC5.86□□□□□ -1.47
SEC61A1P61619 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC5.86□□□□□ -1.47
SEC61A1P61619 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC5.86□□□□□ -1.47
SEC61A1P61619 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.86□□□□□ -1.47
SEC61A1P61619 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.86□□□□□ -1.47
SEC61A1P61619 RPSAP24-201ENST00000461543 873 ntBASIC5.86□□□□□ -1.47
SEC61A1P61619 AP000805.1-201ENST00000471604 784 ntBASIC5.86□□□□□ -1.47
SEC61A1P61619 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.86□□□□□ -1.47
SEC61A1P61619 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.86□□□□□ -1.47
SEC61A1P61619 RN7SKP67-201ENST00000515905 235 ntBASIC5.86□□□□□ -1.47
SEC61A1P61619 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.86□□□□□ -1.47
SEC61A1P61619 CARSP2-201ENST00000520688 277 ntBASIC5.86□□□□□ -1.47
SEC61A1P61619 AC110056.1-201ENST00000525759 911 ntBASIC5.86□□□□□ -1.47
SEC61A1P61619 AP001804.1-201ENST00000526868 919 ntBASIC5.86□□□□□ -1.47
SEC61A1P61619 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.86□□□□□ -1.47
SEC61A1P61619 HMGN1P26-201ENST00000558737 303 ntBASIC5.86□□□□□ -1.47
SEC61A1P61619 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms