Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL035410.2-201ENST00000604963 864 ntBASIC5.92□□□□□ -1.46
SOX2P48431 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX2P48431 AL161420.1-201ENST00000619393 264 ntBASIC5.92□□□□□ -1.46
SOX2P48431 AL138955.1-201ENST00000622881 1040 ntBASIC5.92□□□□□ -1.46
SOX2P48431 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC5.92□□□□□ -1.46
SOX2P48431 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX2P48431 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX2P48431 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC5.92□□□□□ -1.46
SOX2P48431 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SOX2P48431 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
SOX2P48431 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SOX2P48431 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX2P48431 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX2P48431 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX2P48431 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 DOCK11P1-201ENST00000553480 5932 ntBASIC5.91□□□□□ -1.46
SOX2P48431 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC5.91□□□□□ -1.46
SOX2P48431 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.91□□□□□ -1.46
SOX2P48431 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SOX2P48431 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 AC090114.1-201ENST00000393266 448 ntBASIC5.91□□□□□ -1.46
SOX2P48431 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC5.91□□□□□ -1.46
SOX2P48431 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX2P48431 TYMSP1-201ENST00000407851 869 ntBASIC5.91□□□□□ -1.46
SOX2P48431 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.91□□□□□ -1.46
SOX2P48431 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.91□□□□□ -1.46
SOX2P48431 AL121882.1-201ENST00000422893 417 ntBASIC5.91□□□□□ -1.46
SOX2P48431 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.91□□□□□ -1.46
SOX2P48431 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.91□□□□□ -1.46
SOX2P48431 AC245452.2-201ENST00000435222 392 ntBASIC5.91□□□□□ -1.46
SOX2P48431 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.91□□□□□ -1.46
SOX2P48431 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX2P48431 SUMO2P1-206ENST00000445436 284 ntBASIC5.91□□□□□ -1.46
SOX2P48431 AC114755.1-201ENST00000453101 868 ntBASIC5.91□□□□□ -1.46
SOX2P48431 EIF2S2P5-201ENST00000457635 968 ntBASIC5.91□□□□□ -1.46
SOX2P48431 BX323845.2-201ENST00000458382 234 ntBASIC5.91□□□□□ -1.46
SOX2P48431 RPS12P20-201ENST00000464109 380 ntBASIC5.91□□□□□ -1.46
SOX2P48431 AC008620.1-201ENST00000468453 592 ntBASIC5.91□□□□□ -1.46
SOX2P48431 RN7SL815P-201ENST00000470970 290 ntBASIC5.91□□□□□ -1.46
SOX2P48431 RN7SL685P-201ENST00000476271 298 ntBASIC5.91□□□□□ -1.46
SOX2P48431 RN7SL647P-201ENST00000485429 300 ntBASIC5.91□□□□□ -1.46
SOX2P48431 RPL5P3-201ENST00000493817 889 ntBASIC5.91□□□□□ -1.46
SOX2P48431 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX2P48431 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.91□□□□□ -1.46
SOX2P48431 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.91□□□□□ -1.46
SOX2P48431 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.91□□□□□ -1.46
SOX2P48431 AC016559.1-201ENST00000511420 199 ntBASIC5.91□□□□□ -1.46
SOX2P48431 AC110760.3-202ENST00000515177 371 ntBASIC5.91□□□□□ -1.46
SOX2P48431 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.91□□□□□ -1.46
SOX2P48431 AP003084.1-201ENST00000524828 742 ntBASIC5.91□□□□□ -1.46
SOX2P48431 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC5.91□□□□□ -1.46
SOX2P48431 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX2P48431 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.91□□□□□ -1.46
SOX2P48431 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC5.91□□□□□ -1.46
SOX2P48431 CKS1BP1-201ENST00000555221 240 ntBASIC5.91□□□□□ -1.46
SOX2P48431 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC5.91□□□□□ -1.46
SOX2P48431 AC027281.1-201ENST00000574178 758 ntBASIC5.91□□□□□ -1.46
SOX2P48431 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.91□□□□□ -1.46
SOX2P48431 MIR4301-201ENST00000577203 66 ntBASIC5.91□□□□□ -1.46
SOX2P48431 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC5.91□□□□□ -1.46
SOX2P48431 RN7SL697P-201ENST00000582484 299 ntBASIC5.91□□□□□ -1.46
SOX2P48431 AC245884.10-201ENST00000597355 337 ntBASIC5.91□□□□□ -1.46
SOX2P48431 AC007255.2-201ENST00000604053 631 ntBASIC5.91□□□□□ -1.46
SOX2P48431 AC004908.1-201ENST00000606572 541 ntBASIC5.91□□□□□ -1.46
SOX2P48431 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX2P48431 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.91□□□□□ -1.46
SOX2P48431 PART1_3.1-201ENST00000619680 131 ntBASIC5.91□□□□□ -1.46
SOX2P48431 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX2P48431 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
SOX2P48431 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SOX2P48431 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 AC087565.3-202ENST00000642085 1603 ntBASIC5.91□□□□□ -1.46
SOX2P48431 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.91□□□□□ -1.46
SOX2P48431 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SOX2P48431 AC090774.4-201ENST00000578888 1372 ntBASIC5.91□□□□□ -1.46
SOX2P48431 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.91□□□□□ -1.46
SOX2P48431 AC079753.1-201ENST00000623243 3868 ntBASIC5.91□□□□□ -1.46
SOX2P48431 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SOX2P48431 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.9□□□□□ -1.46
SOX2P48431 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.9□□□□□ -1.46
SOX2P48431 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms