Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL1P09341 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CXCL1P09341 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL1P09341 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL1P09341 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CXCL1P09341 U3.10-201ENST00000364459 214 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 RNU1-55P-201ENST00000365510 158 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.93□□□□□ -1.62
CXCL1P09341 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CXCL1P09341 RPS3AP5-201ENST00000389400 821 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 LSM5-202ENST00000409292 538 ntTSL 2 BASIC4.93□□□□□ -1.62
CXCL1P09341 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC4.93□□□□□ -1.62
CXCL1P09341 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL1P09341 AC125238.2-201ENST00000430003 1440 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 AF274573.1-201ENST00000430535 494 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 AL645936.2-201ENST00000430565 928 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC4.93□□□□□ -1.62
CXCL1P09341 RPL5P25-201ENST00000441148 775 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.93□□□□□ -1.62
CXCL1P09341 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL1P09341 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC4.93□□□□□ -1.62
CXCL1P09341 HIST1H2APS6-201ENST00000448609 364 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 MEF2AP1-201ENST00000454867 863 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 GAPDHP53-201ENST00000458397 924 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 RN7SL213P-201ENST00000463482 317 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC4.93□□□□□ -1.62
CXCL1P09341 RPL23AP64-201ENST00000469465 435 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 RN7SL228P-201ENST00000470060 303 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 RN7SL608P-201ENST00000492377 279 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 HNRNPA1P17-201ENST00000496620 924 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL1P09341 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC4.93□□□□□ -1.62
CXCL1P09341 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 AP003041.2-201ENST00000525666 1180 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC4.93□□□□□ -1.62
CXCL1P09341 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL1P09341 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC4.93□□□□□ -1.62
CXCL1P09341 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC4.93□□□□□ -1.62
CXCL1P09341 AC090286.3-201ENST00000573133 187 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 AL583832.1-201ENST00000603227 784 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 AL021368.3-201ENST00000607119 578 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC4.93□□□□□ -1.62
CXCL1P09341 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 AC023632.6-201ENST00000624338 2177 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 AC125336.1-201ENST00000508893 2827 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 AC092692.1-201ENST00000623625 2595 ntBASIC4.93□□□□□ -1.62
CXCL1P09341 BTK-209ENST00000618050 2417 ntTSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL1P09341 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
CXCL1P09341 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.93□□□□□ -1.62
CXCL1P09341 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.93□□□□□ -1.62
CXCL1P09341 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL1P09341 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.92□□□□□ -1.62
CXCL1P09341 AC011416.1-201ENST00000514947 1732 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL1P09341 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL1P09341 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL1P09341 AL512329.1-201ENST00000404600 1592 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL1P09341 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC4.92□□□□□ -1.62
CXCL1P09341 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL1P09341 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL1P09341 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL1P09341 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL1P09341 AC114774.1-201ENST00000507410 1770 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 SNORA51.7-201ENST00000384171 134 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CXCL1P09341 AL157698.1-201ENST00000415190 1011 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 GAPDHP57-201ENST00000424400 585 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 AC007365.2-201ENST00000428806 458 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC4.92□□□□□ -1.62
CXCL1P09341 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC4.92□□□□□ -1.62
CXCL1P09341 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC4.92□□□□□ -1.62
CXCL1P09341 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC4.92□□□□□ -1.62
CXCL1P09341 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC4.92□□□□□ -1.62
CXCL1P09341 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC4.92□□□□□ -1.62
CXCL1P09341 RPL7L1P3-201ENST00000455249 689 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.92□□□□□ -1.62
CXCL1P09341 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC4.92□□□□□ -1.62
CXCL1P09341 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC4.92□□□□□ -1.62
CXCL1P09341 NACAP6-201ENST00000509572 622 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 EIF3KP1-201ENST00000513279 656 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 AC026774.2-201ENST00000513990 1098 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 AP001803.1-201ENST00000525668 147 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC4.92□□□□□ -1.62
CXCL1P09341 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC4.92□□□□□ -1.62
CXCL1P09341 OR7E161P-201ENST00000533722 967 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC4.92□□□□□ -1.62
CXCL1P09341 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC4.92□□□□□ -1.62
CXCL1P09341 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms