Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC162PA2VCL2 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC162PA2VCL2 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC162PA2VCL2 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC162PA2VCL2 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC162PA2VCL2 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AC010132.4-201ENST00000569883 1368 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 PSMC1P4-201ENST00000515236 1327 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AP002370.1-201ENST00000528055 1602 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 RNA5SP333-201ENST00000363466 118 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 RNA5SP334-201ENST00000364825 118 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 TRGV5P-201ENST00000419915 354 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 PTPN2P1-201ENST00000423212 1072 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AC009963.4-201ENST00000448535 339 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 RBMY2BP-202ENST00000451071 1156 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 RN7SKP198-201ENST00000459286 306 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 RN7SL37P-201ENST00000490461 307 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 RPL17P2-201ENST00000491913 451 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AC245052.7-201ENST00000601161 359 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 BUB1P1-201ENST00000603541 607 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AC016590.3-201ENST00000611171 753 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 AC114546.4-201ENST00000624413 369 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 USP9YP3-201ENST00000434481 1766 ntBASIC6.59□□□□□ -1.35
CCDC162PA2VCL2 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC162PA2VCL2 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC162PA2VCL2 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC162PA2VCL2 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 AL353133.1-201ENST00000407695 401 ntBASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 RPSAP41-201ENST00000439695 860 ntBASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 GAPDHP33-201ENST00000443168 1013 ntBASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 AC236972.4-201ENST00000458091 963 ntBASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 AC022415.1-202ENST00000486612 523 ntBASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 RN7SL350P-201ENST00000492591 299 ntBASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 RN7SKP196-201ENST00000516267 345 ntBASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CCDC162PA2VCL2 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms