Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DRB4X5D2U9 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DRB4X5D2U9 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DRB4X5D2U9 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DRB4X5D2U9 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HLA-DRB4X5D2U9 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC4.96□□□□□ -1.61
HLA-DRB4X5D2U9 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 MSL3P1-202ENST00000440028 1468 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 OR2M1P-201ENST00000318104 951 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 RNA5SP382-201ENST00000363355 112 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AL672212.1-201ENST00000422246 400 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 KATNBL1P2-201ENST00000433311 835 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 RPL26P30-201ENST00000453533 435 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 TREML3P-201ENST00000457327 501 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 PFN2-213ENST00000494827 793 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AL390198.2-201ENST00000510553 222 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AC023080.1-201ENST00000551663 931 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AL445383.1-201ENST00000554689 874 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 ANP32BP1-202ENST00000568553 737 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AC011921.2-201ENST00000589465 152 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 OR7E19P-202ENST00000589942 844 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 Z93930.3-201ENST00000607919 749 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 TCL6_3.1-201ENST00000619064 137 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AC126474.2-201ENST00000623268 1750 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 AL512353.3-201ENST00000417517 1326 ntBASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DRB4X5D2U9 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AL592429.1-201ENST00000403909 1473 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 RNA5SP321-201ENST00000362722 111 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 SNORA38B-201ENST00000363524 131 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 RN7SKP237-201ENST00000364663 301 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 RNU1-59P-201ENST00000364829 162 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 MIR431-201ENST00000385266 114 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 RNU11-201ENST00000387069 134 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 OR52N3P-201ENST00000413417 934 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 MEAF6P1-201ENST00000416092 327 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AC007568.1-201ENST00000422912 471 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 REG1CP-206ENST00000447469 496 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AL139156.3-201ENST00000454802 394 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 SULT1D1P-201ENST00000458020 882 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 UOX-201ENST00000471089 899 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 SCG5-207ENST00000497208 949 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AC083906.1-201ENST00000509298 406 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AC008868.1-201ENST00000509786 737 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 IGLV3-6-201ENST00000523937 250 ntBASIC4.95□□□□□ -1.62
HLA-DRB4X5D2U9 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms