Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC027243.2-201ENST00000602530 724 ntBASIC10.76□□□□□ -0.69
PHF8Q9UPP1 AL008726.1-201ENST00000607703 569 ntTSL 4 BASIC10.76□□□□□ -0.69
PHF8Q9UPP1 AL008582.1-201ENST00000609612 442 ntBASIC10.76□□□□□ -0.69
PHF8Q9UPP1 MIR4278-201ENST00000636094 69 ntBASIC10.76□□□□□ -0.69
PHF8Q9UPP1 DCAF1-202ENST00000423656 5946 ntAPPRIS P4 TSL 5 BASIC10.76□□□□□ -0.69
PHF8Q9UPP1 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC10.76□□□□□ -0.69
PHF8Q9UPP1 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PHF8Q9UPP1 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PHF8Q9UPP1 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PHF8Q9UPP1 LINC01484-203ENST00000521128 2361 ntTSL 2 BASIC10.76□□□□□ -0.69
PHF8Q9UPP1 JAKMIP2-202ENST00000333010 2992 ntTSL 2 BASIC10.76□□□□□ -0.69
PHF8Q9UPP1 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC10.76□□□□□ -0.69
PHF8Q9UPP1 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PHF8Q9UPP1 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
PHF8Q9UPP1 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PHF8Q9UPP1 AP000776.1-201ENST00000530032 1663 ntBASIC10.76□□□□□ -0.69
PHF8Q9UPP1 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
PHF8Q9UPP1 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 TTC23-203ENST00000394132 3849 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 TMSB4XP4-201ENST00000323496 618 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 RNU6-876P-201ENST00000391295 104 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 SOD1P1-201ENST00000407803 440 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 AKR1B10P1-201ENST00000425765 942 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 SNX18P14-201ENST00000429308 574 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 AC096743.1-201ENST00000485172 319 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 IGBP1P5-201ENST00000507524 1000 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 AC068134.3-201ENST00000513620 788 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 AL352979.3-201ENST00000553515 247 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 MTCO1P40-201ENST00000574371 625 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 AC007136.1-201ENST00000589141 199 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 LLPHP1-201ENST00000603571 367 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 WBP1LP12-201ENST00000604449 331 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 AL390816.3-201ENST00000604527 1066 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 AC073137.1-201ENST00000605636 634 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 AC012557.1-201ENST00000607115 611 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 AC106782.7-201ENST00000624024 418 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 AC133555.5-201ENST00000624430 418 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 PCMTD1P7-201ENST00000634506 357 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 CIT-201ENST00000261833 8578 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 POU6F2-210ENST00000559001 2403 ntTSL 5 BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 MTCO1P18-201ENST00000455518 1419 ntBASIC10.75□□□□□ -0.69
PHF8Q9UPP1 NBPF19-203ENST00000578189 5034 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PHF8Q9UPP1 MCTP1-204ENST00000505078 2629 ntTSL 2 BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 PTPRA-204ENST00000380393 3636 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 CD28-202ENST00000374481 4526 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 RNU6-931P-201ENST00000363850 107 ntBASIC10.74□□□□□ -0.69
PHF8Q9UPP1 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 MIR1302-11-201ENST00000408051 138 ntBASIC10.74□□□□□ -0.69
PHF8Q9UPP1 MIR1302-9-201ENST00000408365 138 ntBASIC10.74□□□□□ -0.69
PHF8Q9UPP1 SNORA11D-201ENST00000408548 128 ntBASIC10.74□□□□□ -0.69
PHF8Q9UPP1 MIR1302-10-201ENST00000408734 138 ntBASIC10.74□□□□□ -0.69
PHF8Q9UPP1 SNORA11E-201ENST00000408778 128 ntBASIC10.74□□□□□ -0.69
PHF8Q9UPP1 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 AL139421.1-201ENST00000423010 169 ntBASIC10.74□□□□□ -0.69
PHF8Q9UPP1 OR8F1P-201ENST00000425243 930 ntBASIC10.74□□□□□ -0.69
PHF8Q9UPP1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 USP9YP9-201ENST00000429406 715 ntBASIC10.74□□□□□ -0.69
PHF8Q9UPP1 AC099344.1-201ENST00000433548 492 ntBASIC10.74□□□□□ -0.69
PHF8Q9UPP1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 RPS7P4-201ENST00000444127 582 ntBASIC10.74□□□□□ -0.69
PHF8Q9UPP1 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PHF8Q9UPP1 GCNT1P5-201ENST00000449274 682 ntBASIC10.74□□□□□ -0.69
PHF8Q9UPP1 RPL36AP33-201ENST00000450395 310 ntBASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms