Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AL132796.3-201ENST00000624703 900 ntBASIC9.26□□□□□ -0.93
SIN3AQ96ST3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 LINC01613-201ENST00000561476 2780 ntBASIC9.26□□□□□ -0.93
SIN3AQ96ST3 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 OR6M2P-202ENST00000641780 2063 ntBASIC9.25□□□□□ -0.93
SIN3AQ96ST3 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 CASC19-246ENST00000641625 1606 ntBASIC9.25□□□□□ -0.93
SIN3AQ96ST3 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 RN7SKP184-201ENST00000362348 333 ntBASIC9.25□□□□□ -0.93
SIN3AQ96ST3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 THEM7P-201ENST00000419556 672 ntBASIC9.25□□□□□ -0.93
SIN3AQ96ST3 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 AL117692.1-201ENST00000494283 713 ntBASIC9.25□□□□□ -0.93
SIN3AQ96ST3 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 WBP1LP11-201ENST00000586141 328 ntBASIC9.25□□□□□ -0.93
SIN3AQ96ST3 AC244100.4-201ENST00000617747 388 ntBASIC9.25□□□□□ -0.93
SIN3AQ96ST3 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 AC011815.2-201ENST00000618230 2021 ntBASIC9.25□□□□□ -0.93
SIN3AQ96ST3 AL391261.1-201ENST00000555712 1479 ntBASIC9.25□□□□□ -0.93
SIN3AQ96ST3 AL359976.1-201ENST00000418655 3528 ntBASIC9.25□□□□□ -0.93
SIN3AQ96ST3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SIN3AQ96ST3 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 AL136984.1-201ENST00000607611 1893 ntBASIC9.24□□□□□ -0.93
SIN3AQ96ST3 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 LINC02035-201ENST00000610128 5476 ntBASIC9.24□□□□□ -0.93
SIN3AQ96ST3 SNORD16-201ENST00000362803 99 ntBASIC9.24□□□□□ -0.93
SIN3AQ96ST3 RNA5SP198-201ENST00000410376 127 ntBASIC9.24□□□□□ -0.93
SIN3AQ96ST3 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 H3F3AP5-201ENST00000475267 429 ntBASIC9.24□□□□□ -0.93
SIN3AQ96ST3 RPL12P31-201ENST00000478433 450 ntBASIC9.24□□□□□ -0.93
SIN3AQ96ST3 AC096754.1-201ENST00000508904 818 ntBASIC9.24□□□□□ -0.93
SIN3AQ96ST3 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 IGKV1D-22-201ENST00000518953 324 ntBASIC9.24□□□□□ -0.93
SIN3AQ96ST3 COX6B1P4-201ENST00000519826 484 ntBASIC9.24□□□□□ -0.93
SIN3AQ96ST3 AP003033.2-201ENST00000528901 805 ntBASIC9.24□□□□□ -0.93
SIN3AQ96ST3 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 AC005632.2-201ENST00000564271 828 ntBASIC9.24□□□□□ -0.93
SIN3AQ96ST3 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 AL132640.3-201ENST00000630473 177 ntBASIC9.24□□□□□ -0.93
SIN3AQ96ST3 OR7E91P-202ENST00000642062 1198 ntBASIC9.24□□□□□ -0.93
SIN3AQ96ST3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 CAST-202ENST00000325674 3356 ntTSL 5 BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 AC105235.1-201ENST00000623208 1816 ntBASIC9.24□□□□□ -0.93
SIN3AQ96ST3 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC9.24□□□□□ -0.93
SIN3AQ96ST3 PPBPP2-201ENST00000513150 1362 ntBASIC9.24□□□□□ -0.93
SIN3AQ96ST3 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 AC022034.1-201ENST00000512867 2156 ntBASIC9.23□□□□□ -0.93
SIN3AQ96ST3 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 STAG3L4-201ENST00000352103 530 ntBASIC9.23□□□□□ -0.93
SIN3AQ96ST3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 AC017035.1-201ENST00000411999 1115 ntBASIC9.23□□□□□ -0.93
SIN3AQ96ST3 PLA2G12AP2-201ENST00000424744 264 ntBASIC9.23□□□□□ -0.93
SIN3AQ96ST3 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 OR5M2P-202ENST00000641241 4242 ntBASIC9.23□□□□□ -0.93
SIN3AQ96ST3 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SIN3AQ96ST3 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms