Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC095052.1-201ENST00000509955 863 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 AC020937.1-201ENST00000519677 1013 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 AP003115.1-201ENST00000569849 463 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 FO393422.1-201ENST00000603908 708 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 SAMMSON-227ENST00000642114 1199 ntBASIC6.32□□□□□ -1.4
RIF1Q5UIP0 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.32□□□□□ -1.4
RIF1Q5UIP0 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AC007993.1-201ENST00000621298 2430 ntBASIC6.31□□□□□ -1.4
RIF1Q5UIP0 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 BX284632.2-201ENST00000421091 399 ntBASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 MTND6P8-201ENST00000503471 522 ntBASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AP000648.1-201ENST00000529682 397 ntBASIC6.31□□□□□ -1.4
RIF1Q5UIP0 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AL031601.1-201ENST00000605702 394 ntBASIC6.31□□□□□ -1.4
RIF1Q5UIP0 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 CCNT2P1-201ENST00000423082 1315 ntBASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AC061975.7-201ENST00000592016 2692 ntBASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AC083806.2-201ENST00000617795 2685 ntBASIC6.31□□□□□ -1.4
RIF1Q5UIP0 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 OR2A20P-201ENST00000479887 2913 ntBASIC6.31□□□□□ -1.4
RIF1Q5UIP0 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 SNORA21-201ENST00000362423 132 ntBASIC6.31□□□□□ -1.4
RIF1Q5UIP0 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 RN7SL369P-201ENST00000477138 299 ntBASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AC093890.1-201ENST00000502554 540 ntBASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 GLUD1P2-201ENST00000583339 201 ntBASIC6.31□□□□□ -1.4
RIF1Q5UIP0 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AF230666.2-201ENST00000602328 725 ntBASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AC104695.2-201ENST00000605056 775 ntBASIC6.31□□□□□ -1.4
RIF1Q5UIP0 AC245014.3-201ENST00000618589 347 ntBASIC6.31□□□□□ -1.4
RIF1Q5UIP0 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIF1Q5UIP0 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 AC132219.2-201ENST00000624416 2327 ntBASIC6.3□□□□□ -1.4
RIF1Q5UIP0 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 MIR141-201ENST00000384975 95 ntBASIC6.3□□□□□ -1.4
RIF1Q5UIP0 AC008753.1-201ENST00000423096 284 ntBASIC6.3□□□□□ -1.4
RIF1Q5UIP0 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 EMC3-AS1-205ENST00000438698 534 ntBASIC6.3□□□□□ -1.4
RIF1Q5UIP0 RPL35AP28-201ENST00000459730 331 ntBASIC6.3□□□□□ -1.4
RIF1Q5UIP0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.3□□□□□ -1.4
RIF1Q5UIP0 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms