Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL078601.3-201ENST00000573303 535 ntBASIC7.85□□□□□ -1.15
RHBDL3P58872 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.85□□□□□ -1.15
RHBDL3P58872 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.85□□□□□ -1.15
RHBDL3P58872 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.85□□□□□ -1.15
RHBDL3P58872 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.85□□□□□ -1.15
RHBDL3P58872 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.85□□□□□ -1.15
RHBDL3P58872 CASC19-274ENST00000642018 970 ntBASIC7.85□□□□□ -1.15
RHBDL3P58872 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
RHBDL3P58872 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
RHBDL3P58872 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RHBDL3P58872 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RHBDL3P58872 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RHBDL3P58872 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
RHBDL3P58872 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RHBDL3P58872 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RHBDL3P58872 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RHBDL3P58872 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RHBDL3P58872 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RHBDL3P58872 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RHBDL3P58872 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RHBDL3P58872 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
RHBDL3P58872 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RHBDL3P58872 RPL31P11-201ENST00000426558 1558 ntBASIC7.84□□□□□ -1.15
RHBDL3P58872 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.84□□□□□ -1.15
RHBDL3P58872 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
RHBDL3P58872 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.84□□□□□ -1.15
RHBDL3P58872 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RHBDL3P58872 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RHBDL3P58872 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.84□□□□□ -1.15
RHBDL3P58872 MAPK10-261ENST00000641050 3109 ntBASIC7.84□□□□□ -1.15
RHBDL3P58872 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
RHBDL3P58872 YWHAZP6-201ENST00000399764 738 ntBASIC7.84□□□□□ -1.15
RHBDL3P58872 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.84□□□□□ -1.15
RHBDL3P58872 RPL21P50-201ENST00000417698 477 ntBASIC7.84□□□□□ -1.15
RHBDL3P58872 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RHBDL3P58872 AC002127.1-201ENST00000421305 225 ntBASIC7.84□□□□□ -1.15
RHBDL3P58872 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.84□□□□□ -1.15
RHBDL3P58872 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.84□□□□□ -1.15
RHBDL3P58872 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.84□□□□□ -1.15
RHBDL3P58872 AC002486.2-201ENST00000447806 590 ntBASIC7.84□□□□□ -1.15
RHBDL3P58872 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.84□□□□□ -1.15
RHBDL3P58872 RPL23AP68-201ENST00000480924 445 ntBASIC7.84□□□□□ -1.15
RHBDL3P58872 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.84□□□□□ -1.15
RHBDL3P58872 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.84□□□□□ -1.15
RHBDL3P58872 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.84□□□□□ -1.15
RHBDL3P58872 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC7.84□□□□□ -1.15
RHBDL3P58872 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.84□□□□□ -1.15
RHBDL3P58872 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.84□□□□□ -1.15
RHBDL3P58872 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.84□□□□□ -1.15
RHBDL3P58872 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.84□□□□□ -1.15
RHBDL3P58872 AC100814.1-201ENST00000606963 623 ntBASIC7.84□□□□□ -1.15
RHBDL3P58872 AL135999.3-201ENST00000610501 812 ntBASIC7.84□□□□□ -1.15
RHBDL3P58872 U1.41-201ENST00000617626 165 ntBASIC7.84□□□□□ -1.15
RHBDL3P58872 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC7.84□□□□□ -1.15
RHBDL3P58872 TMCC1P1-201ENST00000518897 1980 ntBASIC7.84□□□□□ -1.15
RHBDL3P58872 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.84□□□□□ -1.15
RHBDL3P58872 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RHBDL3P58872 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
RHBDL3P58872 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
RHBDL3P58872 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
RHBDL3P58872 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
RHBDL3P58872 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.16
RHBDL3P58872 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 AF131215.2-201ENST00000531549 1710 ntBASIC7.83□□□□□ -1.16
RHBDL3P58872 AC074141.1-201ENST00000588129 2995 ntBASIC7.83□□□□□ -1.16
RHBDL3P58872 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.83□□□□□ -1.16
RHBDL3P58872 TATDN2P3-201ENST00000452855 3665 ntBASIC7.83□□□□□ -1.16
RHBDL3P58872 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.83□□□□□ -1.16
RHBDL3P58872 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.83□□□□□ -1.16
RHBDL3P58872 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
RHBDL3P58872 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.83□□□□□ -1.16
RHBDL3P58872 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.83□□□□□ -1.16
RHBDL3P58872 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
RHBDL3P58872 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
RHBDL3P58872 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
RHBDL3P58872 AC007068.1-201ENST00000396690 844 ntBASIC7.83□□□□□ -1.16
RHBDL3P58872 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.83□□□□□ -1.16
RHBDL3P58872 AL035422.1-201ENST00000414193 397 ntBASIC7.83□□□□□ -1.16
RHBDL3P58872 AC244453.4-201ENST00000419150 388 ntBASIC7.83□□□□□ -1.16
RHBDL3P58872 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.83□□□□□ -1.16
RHBDL3P58872 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.83□□□□□ -1.16
RHBDL3P58872 OR2L9P-201ENST00000444456 913 ntBASIC7.83□□□□□ -1.16
RHBDL3P58872 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.83□□□□□ -1.16
RHBDL3P58872 AC016687.1-201ENST00000482574 353 ntBASIC7.83□□□□□ -1.16
RHBDL3P58872 AC113367.2-201ENST00000505749 160 ntBASIC7.83□□□□□ -1.16
RHBDL3P58872 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RHBDL3P58872 AC011853.1-201ENST00000518911 454 ntBASIC7.83□□□□□ -1.16
RHBDL3P58872 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.83□□□□□ -1.16
RHBDL3P58872 AC084121.1-201ENST00000533882 835 ntBASIC7.83□□□□□ -1.16
RHBDL3P58872 AC026826.3-201ENST00000561747 158 ntBASIC7.83□□□□□ -1.16
RHBDL3P58872 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC7.83□□□□□ -1.16
RHBDL3P58872 AC004232.2-201ENST00000574245 821 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms