Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.76□□□□□ -1.33
CDH6P55285 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDH6P55285 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.75□□□□□ -1.33
CDH6P55285 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDH6P55285 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDH6P55285 OR7A2P-201ENST00000304105 930 ntBASIC6.75□□□□□ -1.33
CDH6P55285 RNA5SP308-201ENST00000362532 115 ntBASIC6.75□□□□□ -1.33
CDH6P55285 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.75□□□□□ -1.33
CDH6P55285 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.75□□□□□ -1.33
CDH6P55285 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.75□□□□□ -1.33
CDH6P55285 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.75□□□□□ -1.33
CDH6P55285 CCNJP1-201ENST00000450600 1149 ntBASIC6.75□□□□□ -1.33
CDH6P55285 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.75□□□□□ -1.33
CDH6P55285 RN7SL790P-201ENST00000474043 298 ntBASIC6.75□□□□□ -1.33
CDH6P55285 RPL5P12-201ENST00000477071 851 ntBASIC6.75□□□□□ -1.33
CDH6P55285 AC009567.2-201ENST00000502989 349 ntBASIC6.75□□□□□ -1.33
CDH6P55285 AC131392.1-201ENST00000506490 633 ntBASIC6.75□□□□□ -1.33
CDH6P55285 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.75□□□□□ -1.33
CDH6P55285 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.75□□□□□ -1.33
CDH6P55285 RN7SKP64-201ENST00000517206 328 ntBASIC6.75□□□□□ -1.33
CDH6P55285 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.75□□□□□ -1.33
CDH6P55285 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.75□□□□□ -1.33
CDH6P55285 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.75□□□□□ -1.33
CDH6P55285 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CDH6P55285 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.75□□□□□ -1.33
CDH6P55285 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.75□□□□□ -1.33
CDH6P55285 OR4C49P-201ENST00000563891 900 ntBASIC6.75□□□□□ -1.33
CDH6P55285 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.75□□□□□ -1.33
CDH6P55285 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.75□□□□□ -1.33
CDH6P55285 MIR4301-201ENST00000577203 66 ntBASIC6.75□□□□□ -1.33
CDH6P55285 PRELID3BP3-201ENST00000584963 545 ntBASIC6.75□□□□□ -1.33
CDH6P55285 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.75□□□□□ -1.33
CDH6P55285 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.75□□□□□ -1.33
CDH6P55285 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.75□□□□□ -1.33
CDH6P55285 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.75□□□□□ -1.33
CDH6P55285 AC012175.1-201ENST00000603755 531 ntBASIC6.75□□□□□ -1.33
CDH6P55285 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.75□□□□□ -1.33
CDH6P55285 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDH6P55285 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.75□□□□□ -1.33
CDH6P55285 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.75□□□□□ -1.33
CDH6P55285 AL132640.3-201ENST00000630473 177 ntBASIC6.75□□□□□ -1.33
CDH6P55285 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CDH6P55285 AC007114.2-201ENST00000576014 4281 ntBASIC6.75□□□□□ -1.33
CDH6P55285 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CDH6P55285 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.75□□□□□ -1.33
CDH6P55285 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CDH6P55285 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDH6P55285 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.75□□□□□ -1.33
CDH6P55285 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CDH6P55285 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.75□□□□□ -1.33
CDH6P55285 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDH6P55285 CUBNP3-201ENST00000457461 1784 ntBASIC6.74□□□□□ -1.33
CDH6P55285 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH6P55285 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
CDH6P55285 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDH6P55285 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.74□□□□□ -1.33
CDH6P55285 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH6P55285 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDH6P55285 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH6P55285 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH6P55285 SNORA7A-201ENST00000384765 139 ntBASIC6.74□□□□□ -1.33
CDH6P55285 AC017035.1-201ENST00000411999 1115 ntBASIC6.74□□□□□ -1.33
CDH6P55285 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.74□□□□□ -1.33
CDH6P55285 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.74□□□□□ -1.33
CDH6P55285 AC006509.1-201ENST00000420788 634 ntBASIC6.74□□□□□ -1.33
CDH6P55285 AL589794.1-201ENST00000424971 390 ntBASIC6.74□□□□□ -1.33
CDH6P55285 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.74□□□□□ -1.33
CDH6P55285 AC234771.4-201ENST00000441416 730 ntBASIC6.74□□□□□ -1.33
CDH6P55285 HMGN1P32-201ENST00000441744 256 ntBASIC6.74□□□□□ -1.33
CDH6P55285 RPL31P11-202ENST00000454082 372 ntBASIC6.74□□□□□ -1.33
CDH6P55285 AC063955.1-201ENST00000462872 685 ntBASIC6.74□□□□□ -1.33
CDH6P55285 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.74□□□□□ -1.33
CDH6P55285 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.74□□□□□ -1.33
CDH6P55285 AC131935.1-201ENST00000524621 333 ntBASIC6.74□□□□□ -1.33
CDH6P55285 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.74□□□□□ -1.33
CDH6P55285 AC026956.1-201ENST00000558741 396 ntBASIC6.74□□□□□ -1.33
CDH6P55285 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.74□□□□□ -1.33
CDH6P55285 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.74□□□□□ -1.33
CDH6P55285 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.74□□□□□ -1.33
CDH6P55285 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.74□□□□□ -1.33
CDH6P55285 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDH6P55285 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH6P55285 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH6P55285 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.74□□□□□ -1.33
CDH6P55285 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.74□□□□□ -1.33
CDH6P55285 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDH6P55285 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH6P55285 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
CDH6P55285 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDH6P55285 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDH6P55285 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
CDH6P55285 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.73□□□□□ -1.33
CDH6P55285 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDH6P55285 SAGE3P-201ENST00000619800 1635 ntBASIC6.73□□□□□ -1.33
CDH6P55285 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDH6P55285 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.73□□□□□ -1.33
CDH6P55285 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.73□□□□□ -1.33
CDH6P55285 RNA5SP350-201ENST00000363298 111 ntBASIC6.73□□□□□ -1.33
CDH6P55285 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CDH6P55285 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms