Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VCPP55072 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.17□□□□□ -1.26
VCPP55072 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.17□□□□□ -1.26
VCPP55072 RN7SKP206-201ENST00000410823 293 ntBASIC7.17□□□□□ -1.26
VCPP55072 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.17□□□□□ -1.26
VCPP55072 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC7.17□□□□□ -1.26
VCPP55072 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.17□□□□□ -1.26
VCPP55072 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.17□□□□□ -1.26
VCPP55072 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
VCPP55072 MYL6P3-201ENST00000436904 432 ntBASIC7.17□□□□□ -1.26
VCPP55072 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.17□□□□□ -1.26
VCPP55072 AC074386.1-201ENST00000476560 767 ntBASIC7.17□□□□□ -1.26
VCPP55072 COX6B1P2-201ENST00000489624 230 ntBASIC7.17□□□□□ -1.26
VCPP55072 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.17□□□□□ -1.26
VCPP55072 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.17□□□□□ -1.26
VCPP55072 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.17□□□□□ -1.26
VCPP55072 AC026458.1-201ENST00000564330 438 ntBASIC7.17□□□□□ -1.26
VCPP55072 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.17□□□□□ -1.26
VCPP55072 AC139493.1-201ENST00000604368 397 ntBASIC7.17□□□□□ -1.26
VCPP55072 MIR6798-201ENST00000612887 67 ntBASIC7.17□□□□□ -1.26
VCPP55072 AC120057.5-201ENST00000623840 154 ntBASIC7.17□□□□□ -1.26
VCPP55072 AL354702.2-202ENST00000641481 890 ntBASIC7.17□□□□□ -1.26
VCPP55072 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
VCPP55072 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VCPP55072 AC119674.1-204ENST00000641348 1343 ntBASIC7.17□□□□□ -1.26
VCPP55072 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.17□□□□□ -1.26
VCPP55072 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC7.17□□□□□ -1.26
VCPP55072 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.17□□□□□ -1.26
VCPP55072 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.17□□□□□ -1.26
VCPP55072 CYP2G2P-201ENST00000594920 1485 ntBASIC7.17□□□□□ -1.26
VCPP55072 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VCPP55072 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VCPP55072 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VCPP55072 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.16□□□□□ -1.26
VCPP55072 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VCPP55072 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VCPP55072 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VCPP55072 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VCPP55072 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.16□□□□□ -1.26
VCPP55072 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VCPP55072 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VCPP55072 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.16□□□□□ -1.26
VCPP55072 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.16□□□□□ -1.26
VCPP55072 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VCPP55072 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VCPP55072 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
VCPP55072 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VCPP55072 AC110597.1-201ENST00000562669 3176 ntBASIC7.16□□□□□ -1.26
VCPP55072 RNA5SP512-201ENST00000364550 120 ntBASIC7.16□□□□□ -1.26
VCPP55072 RN7SKP47-201ENST00000365347 328 ntBASIC7.16□□□□□ -1.26
VCPP55072 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
VCPP55072 SNORA77.2-201ENST00000408571 112 ntBASIC7.16□□□□□ -1.26
VCPP55072 RN7SKP129-201ENST00000410288 299 ntBASIC7.16□□□□□ -1.26
VCPP55072 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.16□□□□□ -1.26
VCPP55072 VN1R53P-201ENST00000429536 957 ntBASIC7.16□□□□□ -1.26
VCPP55072 AL359839.1-201ENST00000451975 1160 ntBASIC7.16□□□□□ -1.26
VCPP55072 RN7SL379P-201ENST00000479912 293 ntBASIC7.16□□□□□ -1.26
VCPP55072 RN7SL362P-201ENST00000494228 267 ntBASIC7.16□□□□□ -1.26
VCPP55072 RN7SL101P-201ENST00000496350 279 ntBASIC7.16□□□□□ -1.26
VCPP55072 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.16□□□□□ -1.26
VCPP55072 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.16□□□□□ -1.26
VCPP55072 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7.16□□□□□ -1.26
VCPP55072 RNA5SP441-201ENST00000516809 88 ntBASIC7.16□□□□□ -1.26
VCPP55072 AC027308.1-201ENST00000517993 110 ntBASIC7.16□□□□□ -1.26
VCPP55072 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.16□□□□□ -1.26
VCPP55072 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.16□□□□□ -1.26
VCPP55072 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.16□□□□□ -1.26
VCPP55072 OR52K3P-201ENST00000531655 943 ntBASIC7.16□□□□□ -1.26
VCPP55072 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
VCPP55072 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.16□□□□□ -1.26
VCPP55072 AC002310.3-201ENST00000569728 723 ntBASIC7.16□□□□□ -1.26
VCPP55072 MIR5095-201ENST00000578844 88 ntBASIC7.16□□□□□ -1.26
VCPP55072 MIR4502-201ENST00000580432 81 ntBASIC7.16□□□□□ -1.26
VCPP55072 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.16□□□□□ -1.26
VCPP55072 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.16□□□□□ -1.26
VCPP55072 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.16□□□□□ -1.26
VCPP55072 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VCPP55072 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.16□□□□□ -1.26
VCPP55072 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
VCPP55072 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.16□□□□□ -1.26
VCPP55072 NEK2P4-201ENST00000425793 1329 ntBASIC7.16□□□□□ -1.26
VCPP55072 AL512310.3-201ENST00000547023 1335 ntBASIC7.16□□□□□ -1.26
VCPP55072 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
VCPP55072 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VCPP55072 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
VCPP55072 ABCA11P-202ENST00000504019 2110 ntBASIC7.16□□□□□ -1.26
VCPP55072 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.16□□□□□ -1.26
VCPP55072 AL596244.1-201ENST00000567068 3779 ntBASIC7.16□□□□□ -1.26
VCPP55072 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
VCPP55072 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VCPP55072 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VCPP55072 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VCPP55072 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VCPP55072 DLEU2L-201ENST00000371086 3555 ntBASIC7.15□□□□□ -1.26
VCPP55072 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
VCPP55072 BRD7P1-201ENST00000557705 1915 ntBASIC7.15□□□□□ -1.26
VCPP55072 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.15□□□□□ -1.26
VCPP55072 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
VCPP55072 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.15□□□□□ -1.26
VCPP55072 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms