Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CASC19-228ENST00000641414 1684 ntBASIC6.01□□□□□ -1.45
APOBEC1P41238 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
APOBEC1P41238 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
APOBEC1P41238 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
APOBEC1P41238 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
APOBEC1P41238 PSMC1P4-201ENST00000515236 1327 ntBASIC6□□□□□ -1.45
APOBEC1P41238 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
APOBEC1P41238 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6□□□□□ -1.45
APOBEC1P41238 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6□□□□□ -1.45
APOBEC1P41238 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6□□□□□ -1.45
APOBEC1P41238 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6□□□□□ -1.45
APOBEC1P41238 AC013488.1-201ENST00000526618 1838 ntBASIC6□□□□□ -1.45
APOBEC1P41238 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6□□□□□ -1.45
APOBEC1P41238 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6□□□□□ -1.45
APOBEC1P41238 RNA5SP188-201ENST00000362916 129 ntBASIC6□□□□□ -1.45
APOBEC1P41238 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
APOBEC1P41238 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6□□□□□ -1.45
APOBEC1P41238 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6□□□□□ -1.45
APOBEC1P41238 FDPSP5-201ENST00000399474 1057 ntBASIC6□□□□□ -1.45
APOBEC1P41238 AL590635.1-201ENST00000406314 586 ntBASIC6□□□□□ -1.45
APOBEC1P41238 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6□□□□□ -1.45
APOBEC1P41238 AL359092.1-201ENST00000417156 265 ntBASIC6□□□□□ -1.45
APOBEC1P41238 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6□□□□□ -1.45
APOBEC1P41238 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6□□□□□ -1.45
APOBEC1P41238 SPATA20P1-201ENST00000423089 438 ntBASIC6□□□□□ -1.45
APOBEC1P41238 AL596268.1-201ENST00000427910 1048 ntBASIC6□□□□□ -1.45
APOBEC1P41238 VN1R53P-201ENST00000429536 957 ntBASIC6□□□□□ -1.45
APOBEC1P41238 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6□□□□□ -1.45
APOBEC1P41238 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6□□□□□ -1.45
APOBEC1P41238 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6□□□□□ -1.45
APOBEC1P41238 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6□□□□□ -1.45
APOBEC1P41238 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
APOBEC1P41238 AC099340.1-201ENST00000475247 599 ntBASIC6□□□□□ -1.45
APOBEC1P41238 OR52A4P-202ENST00000481634 799 ntBASIC6□□□□□ -1.45
APOBEC1P41238 RN7SL655P-201ENST00000486087 298 ntBASIC6□□□□□ -1.45
APOBEC1P41238 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6□□□□□ -1.45
APOBEC1P41238 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6□□□□□ -1.45
APOBEC1P41238 CSNK1A1P3-201ENST00000504105 330 ntBASIC6□□□□□ -1.45
APOBEC1P41238 SNORA58-201ENST00000505219 137 ntBASIC6□□□□□ -1.45
APOBEC1P41238 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6□□□□□ -1.45
APOBEC1P41238 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6□□□□□ -1.45
APOBEC1P41238 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6□□□□□ -1.45
APOBEC1P41238 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6□□□□□ -1.45
APOBEC1P41238 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6□□□□□ -1.45
APOBEC1P41238 IGLV3-6-201ENST00000523937 250 ntBASIC6□□□□□ -1.45
APOBEC1P41238 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6□□□□□ -1.45
APOBEC1P41238 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6□□□□□ -1.45
APOBEC1P41238 CHEK2P2-201ENST00000554701 672 ntBASIC6□□□□□ -1.45
APOBEC1P41238 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6□□□□□ -1.45
APOBEC1P41238 AC068408.1-201ENST00000577406 1144 ntBASIC6□□□□□ -1.45
APOBEC1P41238 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6□□□□□ -1.45
APOBEC1P41238 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6□□□□□ -1.45
APOBEC1P41238 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6□□□□□ -1.45
APOBEC1P41238 AL356986.1-201ENST00000604085 341 ntBASIC6□□□□□ -1.45
APOBEC1P41238 CYCSP1-201ENST00000604815 315 ntBASIC6□□□□□ -1.45
APOBEC1P41238 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6□□□□□ -1.45
APOBEC1P41238 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6□□□□□ -1.45
APOBEC1P41238 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6□□□□□ -1.45
APOBEC1P41238 AC007671.1-201ENST00000616957 830 ntBASIC6□□□□□ -1.45
APOBEC1P41238 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6□□□□□ -1.45
APOBEC1P41238 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
APOBEC1P41238 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6□□□□□ -1.45
APOBEC1P41238 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
APOBEC1P41238 AC010132.4-201ENST00000569883 1368 ntBASIC6□□□□□ -1.45
APOBEC1P41238 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6□□□□□ -1.45
APOBEC1P41238 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
APOBEC1P41238 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
APOBEC1P41238 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
APOBEC1P41238 AC062022.1-201ENST00000451026 1684 ntBASIC6□□□□□ -1.45
APOBEC1P41238 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
APOBEC1P41238 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
APOBEC1P41238 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
APOBEC1P41238 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6□□□□□ -1.45
APOBEC1P41238 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
APOBEC1P41238 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
APOBEC1P41238 PSMC1P6-201ENST00000477233 1319 ntBASIC5.99□□□□□ -1.45
APOBEC1P41238 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.99□□□□□ -1.45
APOBEC1P41238 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
APOBEC1P41238 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
APOBEC1P41238 UGT2B27P-201ENST00000505092 1620 ntBASIC5.99□□□□□ -1.45
APOBEC1P41238 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
APOBEC1P41238 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.99□□□□□ -1.45
APOBEC1P41238 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.99□□□□□ -1.45
APOBEC1P41238 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
APOBEC1P41238 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
APOBEC1P41238 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.99□□□□□ -1.45
APOBEC1P41238 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
APOBEC1P41238 PABPC1P8-201ENST00000452851 2086 ntBASIC5.99□□□□□ -1.45
APOBEC1P41238 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.99□□□□□ -1.45
APOBEC1P41238 MKI67P1-201ENST00000604297 1460 ntBASIC5.99□□□□□ -1.45
APOBEC1P41238 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.99□□□□□ -1.45
APOBEC1P41238 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
APOBEC1P41238 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
APOBEC1P41238 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
APOBEC1P41238 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.99□□□□□ -1.45
APOBEC1P41238 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
APOBEC1P41238 AL353133.1-201ENST00000407695 401 ntBASIC5.99□□□□□ -1.45
APOBEC1P41238 AP003385.1-201ENST00000426387 893 ntBASIC5.99□□□□□ -1.45
APOBEC1P41238 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.99□□□□□ -1.45
APOBEC1P41238 XKRYP6-201ENST00000440468 1116 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms