Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RPL12P11-201ENST00000439970 501 ntBASIC6.66□□□□□ -1.34
HMGA1P17096 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGA1P17096 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.66□□□□□ -1.34
HMGA1P17096 SNORA58-201ENST00000505219 137 ntBASIC6.66□□□□□ -1.34
HMGA1P17096 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGA1P17096 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.66□□□□□ -1.34
HMGA1P17096 RN7SKP35-201ENST00000517210 151 ntBASIC6.66□□□□□ -1.34
HMGA1P17096 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.66□□□□□ -1.34
HMGA1P17096 AP000662.1-201ENST00000530952 487 ntBASIC6.66□□□□□ -1.34
HMGA1P17096 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
HMGA1P17096 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGA1P17096 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.66□□□□□ -1.34
HMGA1P17096 AC005726.4-201ENST00000582858 458 ntBASIC6.66□□□□□ -1.34
HMGA1P17096 AP005136.2-201ENST00000583253 1049 ntBASIC6.66□□□□□ -1.34
HMGA1P17096 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.66□□□□□ -1.34
HMGA1P17096 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.66□□□□□ -1.34
HMGA1P17096 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.66□□□□□ -1.34
HMGA1P17096 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.66□□□□□ -1.34
HMGA1P17096 AP001437.1-201ENST00000608783 456 ntBASIC6.66□□□□□ -1.34
HMGA1P17096 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
HMGA1P17096 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGA1P17096 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGA1P17096 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HMGA1P17096 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGA1P17096 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGA1P17096 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGA1P17096 QRSL1P1-201ENST00000400977 1540 ntBASIC6.66□□□□□ -1.34
HMGA1P17096 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
HMGA1P17096 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HMGA1P17096 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HMGA1P17096 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HMGA1P17096 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.65□□□□□ -1.34
HMGA1P17096 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HMGA1P17096 AC005332.9-201ENST00000620266 2921 ntBASIC6.65□□□□□ -1.34
HMGA1P17096 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
HMGA1P17096 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
HMGA1P17096 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HMGA1P17096 RNA5SP346-201ENST00000363541 121 ntBASIC6.65□□□□□ -1.34
HMGA1P17096 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HMGA1P17096 VN1R3-201ENST00000418822 919 ntBASIC6.65□□□□□ -1.34
HMGA1P17096 RPL7AP14-201ENST00000424041 802 ntBASIC6.65□□□□□ -1.34
HMGA1P17096 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HMGA1P17096 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.65□□□□□ -1.34
HMGA1P17096 AC092824.1-201ENST00000483524 576 ntBASIC6.65□□□□□ -1.34
HMGA1P17096 RN7SL714P-201ENST00000487050 298 ntBASIC6.65□□□□□ -1.34
HMGA1P17096 AC091965.3-201ENST00000506236 208 ntBASIC6.65□□□□□ -1.34
HMGA1P17096 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.65□□□□□ -1.34
HMGA1P17096 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.65□□□□□ -1.34
HMGA1P17096 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HMGA1P17096 IGKV3D-25-201ENST00000519599 235 ntBASIC6.65□□□□□ -1.34
HMGA1P17096 COX6B1P4-201ENST00000519826 484 ntBASIC6.65□□□□□ -1.34
HMGA1P17096 NATP-201ENST00000523491 878 ntBASIC6.65□□□□□ -1.34
HMGA1P17096 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.65□□□□□ -1.34
HMGA1P17096 AC090115.2-201ENST00000548060 883 ntBASIC6.65□□□□□ -1.34
HMGA1P17096 MRPS21P8-201ENST00000569196 235 ntBASIC6.65□□□□□ -1.34
HMGA1P17096 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.65□□□□□ -1.34
HMGA1P17096 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HMGA1P17096 AL445647.2-201ENST00000615170 130 ntBASIC6.65□□□□□ -1.34
HMGA1P17096 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HMGA1P17096 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
HMGA1P17096 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.65□□□□□ -1.34
HMGA1P17096 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HMGA1P17096 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
HMGA1P17096 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HMGA1P17096 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
HMGA1P17096 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.65□□□□□ -1.35
HMGA1P17096 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC6.65□□□□□ -1.35
HMGA1P17096 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HMGA1P17096 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.65□□□□□ -1.35
HMGA1P17096 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
HMGA1P17096 CTAGE11P-201ENST00000451540 2353 ntBASIC6.65□□□□□ -1.35
HMGA1P17096 AL133243.2-201ENST00000610331 1621 ntBASIC6.65□□□□□ -1.35
HMGA1P17096 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGA1P17096 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGA1P17096 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HMGA1P17096 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.64□□□□□ -1.35
HMGA1P17096 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGA1P17096 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGA1P17096 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGA1P17096 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
HMGA1P17096 AL358876.1-201ENST00000453364 1075 ntBASIC6.64□□□□□ -1.35
HMGA1P17096 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.64□□□□□ -1.35
HMGA1P17096 NDUFA5P5-201ENST00000468361 342 ntBASIC6.64□□□□□ -1.35
HMGA1P17096 RN7SL326P-201ENST00000477493 296 ntBASIC6.64□□□□□ -1.35
HMGA1P17096 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGA1P17096 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGA1P17096 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGA1P17096 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.64□□□□□ -1.35
HMGA1P17096 AC020765.1-201ENST00000604296 328 ntBASIC6.64□□□□□ -1.35
HMGA1P17096 AC139493.1-201ENST00000604368 397 ntBASIC6.64□□□□□ -1.35
HMGA1P17096 AC073389.3-201ENST00000609434 935 ntBASIC6.64□□□□□ -1.35
HMGA1P17096 MIR6861-201ENST00000618657 64 ntBASIC6.64□□□□□ -1.35
HMGA1P17096 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.64□□□□□ -1.35
HMGA1P17096 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.64□□□□□ -1.35
HMGA1P17096 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
HMGA1P17096 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGA1P17096 AC018717.1-201ENST00000457712 1505 ntBASIC6.64□□□□□ -1.35
HMGA1P17096 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGA1P17096 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGA1P17096 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms