Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AL080312.1-201ENST00000256654 824 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 RNU1-38P-201ENST00000362817 144 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 RNA5SP483-201ENST00000363431 118 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 U3.23-201ENST00000391132 200 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 HBBP1-201ENST00000433329 439 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 AC108039.2-201ENST00000440214 359 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 AL161626.1-201ENST00000441480 490 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 RPSAP49-201ENST00000445182 886 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 RPL6P24-201ENST00000445338 864 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 ATP5G1P6-201ENST00000451206 412 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 NMNAT1P3-201ENST00000457517 888 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 AC016489.1-201ENST00000461109 375 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 RPL34P22-201ENST00000468193 318 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 RN7SL815P-201ENST00000470970 290 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 RN7SL152P-201ENST00000484176 298 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 VDAC2P2-201ENST00000544463 901 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 AL031846.1-201ENST00000560933 314 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 AP001264.1-201ENST00000620602 703 ntBASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
RBFOX3A6NFN3 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
RBFOX3A6NFN3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.09□□□□□ -1.6
RBFOX3A6NFN3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AC090220.1-201ENST00000593078 1699 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AC114876.1-201ENST00000490962 1366 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AC106872.6-201ENST00000514228 1346 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 RNA5SP453-201ENST00000362503 119 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 SNORD1C-201ENST00000363315 78 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 RNA5SP478-201ENST00000364657 115 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 MIR181C-201ENST00000384881 110 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 RN7SKP151-201ENST00000410230 316 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 RN7SKP129-201ENST00000410288 299 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 UBE2V1P14-201ENST00000415815 558 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 RPS7P12-201ENST00000422385 582 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AL354766.1-201ENST00000423396 542 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AC002553.1-201ENST00000442828 802 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 RPL7P14-201ENST00000449851 741 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 RN7SL213P-201ENST00000463482 317 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AC090602.1-201ENST00000469695 252 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 RN7SL549P-201ENST00000478997 282 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AC006070.1-201ENST00000508151 193 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 HIGD1AP9-201ENST00000550710 279 ntBASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.08□□□□□ -1.6
RBFOX3A6NFN3 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms