Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 RNU105B-201ENST00000364478 208 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AL662874.1-201ENST00000426065 230 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AC092017.2-201ENST00000427600 362 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AL122020.1-201ENST00000472287 459 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 SIAH1P1-201ENST00000479411 923 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AP002884.5-201ENST00000595053 1132 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 uc_338.18-201ENST00000615451 175 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AC009166.2-201ENST00000624410 2833 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 ZNF43-202ENST00000357491 5249 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AC007342.5-201ENST00000571340 2142 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 ZNF556-201ENST00000307635 6574 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 U3.2-201ENST00000362981 210 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 SEPT14P12-201ENST00000442280 560 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AL450996.1-201ENST00000445574 1202 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 IGLV3-30-201ENST00000524362 298 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AC130456.6-201ENST00000623745 765 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AC021766.1-201ENST00000624404 741 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 PLEKHA6-201ENST00000272203 7401 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AL161912.4-201ENST00000623889 2468 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AC012313.8-201ENST00000595059 5402 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 OR4C1P-202ENST00000641065 1569 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 PTPN4-201ENST00000263708 10300 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 NWD1-201ENST00000379808 7254 ntTSL 5 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 RPL7L1P11-201ENST00000446092 721 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 CBX1P5-201ENST00000475330 559 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 CYCSP22-201ENST00000517555 339 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AL121579.2-201ENST00000555466 590 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AC009120.3-201ENST00000563335 499 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AC005393.1-201ENST00000617916 584 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AC073342.3-201ENST00000624211 193 ntBASIC6.48□□□□□ -1.37
CHD7Q9P2D1 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 CELF2-202ENST00000399850 7085 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
CHD7Q9P2D1 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 OR4D9-203ENST00000641962 6123 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 MORF4-201ENST00000447135 971 ntBASIC6.47□□□□□ -1.37
CHD7Q9P2D1 AC073850.1-201ENST00000449243 255 ntBASIC6.47□□□□□ -1.37
CHD7Q9P2D1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 AC138866.2-201ENST00000508650 584 ntBASIC6.47□□□□□ -1.37
CHD7Q9P2D1 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CHD7Q9P2D1 ELOCP28-201ENST00000590044 317 ntBASIC6.47□□□□□ -1.37
CHD7Q9P2D1 RPSAP73-201ENST00000614820 330 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms