Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 PDCL3P5-201ENST00000398028 722 ntBASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 SOD1P1-201ENST00000407803 440 ntBASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 AC021876.1-201ENST00000425959 359 ntBASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 AC239367.3-201ENST00000428996 814 ntBASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 Z68868.1-201ENST00000429048 544 ntBASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 ST13P21-201ENST00000453250 1098 ntBASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 RPL23AP68-201ENST00000480924 445 ntBASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 AC107952.1-201ENST00000524200 376 ntBASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 SSU72P6-201ENST00000532644 488 ntBASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 AC126323.4-201ENST00000566935 234 ntBASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 AC004908.1-201ENST00000606572 541 ntBASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 AC007347.2-201ENST00000623044 180 ntBASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 AL121936.2-201ENST00000641935 662 ntBASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 MAPK10-261ENST00000641050 3109 ntBASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 AL353763.1-201ENST00000624467 1628 ntBASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CCNB1IP1Q9NPC3 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 AC102941.1-201ENST00000567616 1537 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 AP002800.1-201ENST00000624982 2225 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 MSL3P1-202ENST00000440028 1468 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 PPIAP26-201ENST00000377951 522 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 RNU1-56P-201ENST00000391303 164 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 AL117344.1-201ENST00000407196 616 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 AL161742.1-201ENST00000418154 584 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 AL451063.1-201ENST00000450164 1133 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 CCNJP2-201ENST00000457810 1163 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 RN7SL492P-201ENST00000460700 295 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 CBX5P1-201ENST00000468470 561 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 RN7SL216P-201ENST00000471607 298 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 RN7SL379P-201ENST00000479912 293 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 RN7SL849P-201ENST00000485236 295 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 AC103855.4-201ENST00000533158 265 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 EIF4A3P1-201ENST00000578499 647 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 CTSLP2-201ENST00000580501 394 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 AC090241.1-201ENST00000587732 621 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 ACTG1P22-201ENST00000603793 1099 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 AC009283.1-201ENST00000615852 645 ntBASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CCNB1IP1Q9NPC3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms