Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 AC006511.3-201ENST00000624929 1783 ntBASIC6.77□□□□□ -1.33
PCDH9Q9HC56 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
PCDH9Q9HC56 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 SNORA70H-201ENST00000383910 135 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 SNORA70J-201ENST00000384182 135 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AL359694.1-201ENST00000403247 604 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AC083855.1-201ENST00000440041 258 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AC022080.2-201ENST00000452932 533 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AC022730.1-201ENST00000473114 568 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 RN7SL70P-201ENST00000478322 302 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 IGHV1-14-201ENST00000523391 241 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AL162632.2-201ENST00000553933 399 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 BMS1P16-201ENST00000556075 1147 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 ANP32BP1-202ENST00000568553 737 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AC016590.3-201ENST00000611171 753 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AC107308.1-201ENST00000615897 301 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AL109924.4-201ENST00000623089 670 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 CCDC150P1-201ENST00000537123 2215 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.76□□□□□ -1.33
PCDH9Q9HC56 AL117378.2-201ENST00000622916 1337 ntBASIC6.76□□□□□ -1.33
PCDH9Q9HC56 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AC119674.1-213ENST00000641177 1386 ntBASIC6.75□□□□□ -1.33
PCDH9Q9HC56 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 RNA5SP321-201ENST00000362722 111 ntBASIC6.75□□□□□ -1.33
PCDH9Q9HC56 RNA5SP350-201ENST00000363298 111 ntBASIC6.75□□□□□ -1.33
PCDH9Q9HC56 SNORA38B-201ENST00000363524 131 ntBASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AL590635.1-201ENST00000406314 586 ntBASIC6.75□□□□□ -1.33
PCDH9Q9HC56 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AC007568.1-201ENST00000422912 471 ntBASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AC115223.1-201ENST00000466377 870 ntBASIC6.75□□□□□ -1.33
PCDH9Q9HC56 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AC117500.1-201ENST00000497352 755 ntBASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AL390198.2-201ENST00000510553 222 ntBASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDH9Q9HC56 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms