Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 RNA5SP308-201ENST00000362532 115 ntBASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 AC099535.1-201ENST00000408928 371 ntBASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 RNU2-18P-201ENST00000411224 162 ntBASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 CDC42P6-201ENST00000421246 576 ntBASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 AC083862.1-201ENST00000427378 1242 ntBASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 SLAMF6P1-201ENST00000451067 602 ntBASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 AP005639.1-201ENST00000526939 192 ntBASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 AL133399.1-201ENST00000527476 298 ntBASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 DIMT1P1-201ENST00000603970 763 ntBASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 AC073046.2-201ENST00000604756 527 ntBASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 AL008723.3-201ENST00000608926 449 ntBASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RSPO3Q9BXY4 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 GUCY1B2-204ENST00000531898 1979 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 MRPS6P2-201ENST00000381143 370 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AL451046.1-201ENST00000406097 534 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 SNORA11.5-201ENST00000408163 128 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 RN7SKP161-201ENST00000411110 305 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AC006509.1-201ENST00000420788 634 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 PTPN2P1-201ENST00000423212 1072 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AL596268.1-201ENST00000427910 1048 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 RPL3P11-201ENST00000434028 1146 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AL020997.1-201ENST00000446554 349 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AC022206.1-201ENST00000495947 347 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 RNA5SP318-201ENST00000516352 92 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 SCARNA11.1-201ENST00000516918 132 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AC090115.2-201ENST00000548060 883 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 BMS1P16-201ENST00000556075 1147 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AC133552.4-201ENST00000576103 676 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AC090616.1-201ENST00000583895 447 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AC114477.1-201ENST00000605097 605 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 PCA3_2.1-201ENST00000612507 409 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AL138693.1-201ENST00000622219 129 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 AC004836.1-201ENST00000623032 634 ntBASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RSPO3Q9BXY4 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 AC093829.1-201ENST00000506662 1618 ntBASIC5.92□□□□□ -1.46
RSPO3Q9BXY4 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms