Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 OR4F8P-201ENST00000589943 937 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC022916.3-201ENST00000592961 742 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 TEX26-AS1-217ENST00000593246 797 ntTSL 5 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 ZNF83-209ENST00000596930 560 ntTSL 4 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 LAMTOR5-AS1-211ENST00000598350 749 ntTSL 5 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 ZNF675-207ENST00000600313 543 ntTSL 4 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC243960.4-201ENST00000600532 288 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC006006.1-201ENST00000603082 144 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 TRMT112P7-201ENST00000603133 367 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 AL162413.1-201ENST00000603198 110 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 Metazoa_SRP.162-201ENST00000613066 277 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 AL356481.2-201ENST00000629902 528 ntTSL 3 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 GPNMB-202ENST00000381990 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 IL5RA-210ENST00000456302 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 STRADA-227ENST00000638309 1383 ntTSL 5 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 HLF-208ENST00000573945 2977 ntTSL 5 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC007614.6-201ENST00000623729 2620 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC090525.2-201ENST00000551685 2270 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 ZNF736P3Y-201ENST00000428264 1465 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 RBBP8-205ENST00000399725 3260 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
USB1Q9BQ65 ZNF80-203ENST00000619534 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
USB1Q9BQ65 AL035555.1-201ENST00000404462 1790 ntBASIC8.05□□□□□ -1.12
USB1Q9BQ65 AC133561.2-202ENST00000561642 1301 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 PIK3R1-202ENST00000336483 2439 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 LINC02452-201ENST00000637833 2982 ntTSL 5 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 DIAPH3-202ENST00000377908 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 C5orf22-201ENST00000325366 3612 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 CCDC25-201ENST00000356537 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 CELF2-212ENST00000632728 3827 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 STEAP2-206ENST00000394632 2072 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 CACNB4-231ENST00000636721 1542 ntTSL 5 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 SLC39A9-202ENST00000336643 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 LINC02292-201ENST00000554522 1701 ntTSL 2 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 ACAP2-215ENST00000618471 3207 ntTSL 5 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 SEZ6L-204ENST00000402979 3306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC000036.1-201ENST00000449652 2030 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 TAS2R60-201ENST00000332690 957 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 Y_RNA.97-201ENST00000363094 102 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 Y_RNA.422-201ENST00000384054 114 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 RNU6-463P-201ENST00000384340 107 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 RPL5P5-201ENST00000392009 893 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 IL6-203ENST00000401651 539 ntTSL 2 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 RPS24P12-201ENST00000402084 394 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AL451061.1-201ENST00000407887 862 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 RNA5SP118-201ENST00000410385 109 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 SOX9-AS1-201ENST00000412640 635 ntTSL 3 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 MIATNB-201ENST00000417083 706 ntTSL 3 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 NCOR1P3-201ENST00000420479 303 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC006455.7-201ENST00000422502 392 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AL161638.2-201ENST00000427319 507 ntTSL 3 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 AL365400.1-201ENST00000431854 640 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC005588.1-201ENST00000439168 162 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC073583.1-201ENST00000447553 400 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 CEACAMP5-201ENST00000448037 961 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC104849.1-201ENST00000462623 405 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AF131215.1-201ENST00000488887 520 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC010608.1-201ENST00000507964 275 ntTSL 4 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 TUBB4BP5-201ENST00000512282 427 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 TRMT10BP1-201ENST00000519377 943 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 RBMS2P1-201ENST00000525031 1226 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AP005597.4-201ENST00000526762 229 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 ZNF252P-203ENST00000527222 876 ntTSL 2 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 WARSP1-201ENST00000533936 454 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 RASA4-217ENST00000538869 483 ntTSL 5 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC025260.1-201ENST00000548858 430 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC009139.1-201ENST00000561672 652 ntTSL 2 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 MIR3972-201ENST00000582732 87 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms