Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC9.29□□□□□ -0.92
SIN3AQ96ST3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 VN2R1P-201ENST00000449668 1743 ntBASIC9.28□□□□□ -0.92
SIN3AQ96ST3 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 MAPK10-287ENST00000641217 3037 ntBASIC9.28□□□□□ -0.92
SIN3AQ96ST3 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 BIN2P1-201ENST00000504996 1530 ntBASIC9.28□□□□□ -0.92
SIN3AQ96ST3 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 YWHAZP4-201ENST00000392459 708 ntBASIC9.28□□□□□ -0.92
SIN3AQ96ST3 AC121334.1-201ENST00000396414 802 ntBASIC9.28□□□□□ -0.92
SIN3AQ96ST3 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 AL139184.1-202ENST00000422303 222 ntBASIC9.28□□□□□ -0.92
SIN3AQ96ST3 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 OR2L9P-201ENST00000444456 913 ntBASIC9.28□□□□□ -0.92
SIN3AQ96ST3 AC092967.1-201ENST00000449016 481 ntBASIC9.28□□□□□ -0.92
SIN3AQ96ST3 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 AC091965.3-201ENST00000506236 208 ntBASIC9.28□□□□□ -0.92
SIN3AQ96ST3 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 KCTD9P4-201ENST00000526766 1166 ntBASIC9.28□□□□□ -0.92
SIN3AQ96ST3 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 GUCY1B2-204ENST00000531898 1979 ntBASIC9.28□□□□□ -0.92
SIN3AQ96ST3 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SIN3AQ96ST3 BRD7P6-201ENST00000431406 1860 ntBASIC9.28□□□□□ -0.92
SIN3AQ96ST3 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC9.27□□□□□ -0.92
SIN3AQ96ST3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
SIN3AQ96ST3 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
SIN3AQ96ST3 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 AL050335.1-201ENST00000396909 869 ntBASIC9.27□□□□□ -0.93
SIN3AQ96ST3 OSTCP4-201ENST00000424397 449 ntBASIC9.27□□□□□ -0.93
SIN3AQ96ST3 RPSAP32-201ENST00000432681 526 ntBASIC9.27□□□□□ -0.93
SIN3AQ96ST3 RPS18P1-201ENST00000447840 458 ntBASIC9.27□□□□□ -0.93
SIN3AQ96ST3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 AC073581.1-201ENST00000519036 575 ntBASIC9.27□□□□□ -0.93
SIN3AQ96ST3 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 AC011500.1-201ENST00000601963 469 ntBASIC9.27□□□□□ -0.93
SIN3AQ96ST3 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC9.27□□□□□ -0.93
SIN3AQ96ST3 AL513218.1-201ENST00000606527 391 ntBASIC9.27□□□□□ -0.93
SIN3AQ96ST3 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 TMEM75-201ENST00000624314 2165 ntBASIC9.27□□□□□ -0.93
SIN3AQ96ST3 OLMALINC-203ENST00000641087 3779 ntBASIC9.27□□□□□ -0.93
SIN3AQ96ST3 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC9.27□□□□□ -0.93
SIN3AQ96ST3 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 AC018717.1-201ENST00000457712 1505 ntBASIC9.26□□□□□ -0.93
SIN3AQ96ST3 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 AC011504.1-201ENST00000623331 4103 ntBASIC9.26□□□□□ -0.93
SIN3AQ96ST3 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 RNA5SP485-201ENST00000365053 119 ntBASIC9.26□□□□□ -0.93
SIN3AQ96ST3 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 AL360013.1-201ENST00000419031 858 ntBASIC9.26□□□□□ -0.93
SIN3AQ96ST3 VN1R20P-201ENST00000425215 966 ntBASIC9.26□□□□□ -0.93
SIN3AQ96ST3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 AL451136.1-201ENST00000435399 325 ntBASIC9.26□□□□□ -0.93
SIN3AQ96ST3 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 OR9A1P-202ENST00000484361 945 ntBASIC9.26□□□□□ -0.93
SIN3AQ96ST3 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 AC023968.1-201ENST00000560719 475 ntBASIC9.26□□□□□ -0.93
SIN3AQ96ST3 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 AC067852.5-201ENST00000589299 310 ntBASIC9.26□□□□□ -0.93
SIN3AQ96ST3 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC9.26□□□□□ -0.93
SIN3AQ96ST3 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms