Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.81□□□□□ -1.16
SNED1Q8TER0 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.81□□□□□ -1.16
SNED1Q8TER0 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SNED1Q8TER0 RNA5SP438-201ENST00000516561 112 ntBASIC7.81□□□□□ -1.16
SNED1Q8TER0 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.81□□□□□ -1.16
SNED1Q8TER0 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.81□□□□□ -1.16
SNED1Q8TER0 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.81□□□□□ -1.16
SNED1Q8TER0 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.81□□□□□ -1.16
SNED1Q8TER0 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SNED1Q8TER0 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.81□□□□□ -1.16
SNED1Q8TER0 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.81□□□□□ -1.16
SNED1Q8TER0 AC108673.3-201ENST00000609183 335 ntBASIC7.81□□□□□ -1.16
SNED1Q8TER0 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.81□□□□□ -1.16
SNED1Q8TER0 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNED1Q8TER0 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
SNED1Q8TER0 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC7.81□□□□□ -1.16
SNED1Q8TER0 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.81□□□□□ -1.16
SNED1Q8TER0 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.81□□□□□ -1.16
SNED1Q8TER0 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNED1Q8TER0 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNED1Q8TER0 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNED1Q8TER0 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SNED1Q8TER0 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SNED1Q8TER0 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
SNED1Q8TER0 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
SNED1Q8TER0 RARSP1-201ENST00000542842 1418 ntBASIC7.81□□□□□ -1.16
SNED1Q8TER0 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.81□□□□□ -1.16
SNED1Q8TER0 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SNED1Q8TER0 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.8□□□□□ -1.16
SNED1Q8TER0 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.8□□□□□ -1.16
SNED1Q8TER0 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SNED1Q8TER0 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.8□□□□□ -1.16
SNED1Q8TER0 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SNED1Q8TER0 CLUHP1-201ENST00000435012 1190 ntBASIC7.8□□□□□ -1.16
SNED1Q8TER0 CFL1P4-201ENST00000451536 498 ntBASIC7.8□□□□□ -1.16
SNED1Q8TER0 AC110749.1-201ENST00000462007 357 ntBASIC7.8□□□□□ -1.16
SNED1Q8TER0 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC7.8□□□□□ -1.16
SNED1Q8TER0 CR383658.1-201ENST00000514609 734 ntBASIC7.8□□□□□ -1.16
SNED1Q8TER0 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC7.8□□□□□ -1.16
SNED1Q8TER0 RNA5SP434-201ENST00000516647 121 ntBASIC7.8□□□□□ -1.16
SNED1Q8TER0 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.8□□□□□ -1.16
SNED1Q8TER0 AC135626.1-201ENST00000556983 435 ntBASIC7.8□□□□□ -1.16
SNED1Q8TER0 AC051619.2-201ENST00000559063 397 ntBASIC7.8□□□□□ -1.16
SNED1Q8TER0 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SNED1Q8TER0 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.8□□□□□ -1.16
SNED1Q8TER0 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.8□□□□□ -1.16
SNED1Q8TER0 AP001823.1-201ENST00000604056 1003 ntBASIC7.8□□□□□ -1.16
SNED1Q8TER0 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.8□□□□□ -1.16
SNED1Q8TER0 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.8□□□□□ -1.16
SNED1Q8TER0 MIR8089-201ENST00000620165 82 ntBASIC7.8□□□□□ -1.16
SNED1Q8TER0 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.8□□□□□ -1.16
SNED1Q8TER0 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.8□□□□□ -1.16
SNED1Q8TER0 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SNED1Q8TER0 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SNED1Q8TER0 AC007993.1-201ENST00000621298 2430 ntBASIC7.8□□□□□ -1.16
SNED1Q8TER0 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
SNED1Q8TER0 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SNED1Q8TER0 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
SNED1Q8TER0 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SNED1Q8TER0 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.8□□□□□ -1.16
SNED1Q8TER0 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SNED1Q8TER0 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SNED1Q8TER0 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SNED1Q8TER0 RNFT1P3-201ENST00000340898 1052 ntBASIC7.79□□□□□ -1.16
SNED1Q8TER0 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SNED1Q8TER0 SNORD16-201ENST00000362803 99 ntBASIC7.79□□□□□ -1.16
SNED1Q8TER0 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.79□□□□□ -1.16
SNED1Q8TER0 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 RPL34P33-201ENST00000486062 334 ntBASIC7.79□□□□□ -1.16
SNED1Q8TER0 AC114781.3-201ENST00000512083 142 ntBASIC7.79□□□□□ -1.16
SNED1Q8TER0 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SNED1Q8TER0 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 OR7E18P-201ENST00000592589 702 ntBASIC7.79□□□□□ -1.16
SNED1Q8TER0 MIR6809-201ENST00000612189 116 ntBASIC7.79□□□□□ -1.16
SNED1Q8TER0 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.79□□□□□ -1.16
SNED1Q8TER0 OR1N1-202ENST00000619659 939 ntBASIC7.79□□□□□ -1.16
SNED1Q8TER0 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.79□□□□□ -1.16
SNED1Q8TER0 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SNED1Q8TER0 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 NEK2P4-201ENST00000425793 1329 ntBASIC7.79□□□□□ -1.16
SNED1Q8TER0 AL512310.3-201ENST00000547023 1335 ntBASIC7.79□□□□□ -1.16
SNED1Q8TER0 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms