Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC9.03□□□□□ -0.96
CCDC27Q2M243 SNX19-202ENST00000426933 888 ntTSL 2 BASIC9.03□□□□□ -0.96
CCDC27Q2M243 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC9.03□□□□□ -0.96
CCDC27Q2M243 AL133480.2-201ENST00000456723 487 ntBASIC9.03□□□□□ -0.96
CCDC27Q2M243 HMGB1P3-201ENST00000502802 616 ntBASIC9.03□□□□□ -0.96
CCDC27Q2M243 AC073648.3-201ENST00000504939 925 ntBASIC9.03□□□□□ -0.96
CCDC27Q2M243 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC9.03□□□□□ -0.96
CCDC27Q2M243 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC9.03□□□□□ -0.96
CCDC27Q2M243 AC130366.1-201ENST00000526505 1192 ntBASIC9.03□□□□□ -0.96
CCDC27Q2M243 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC9.03□□□□□ -0.96
CCDC27Q2M243 AC069240.2-201ENST00000550242 609 ntBASIC9.03□□□□□ -0.96
CCDC27Q2M243 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC9.03□□□□□ -0.96
CCDC27Q2M243 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC9.03□□□□□ -0.96
CCDC27Q2M243 PPIAP14-201ENST00000577627 496 ntBASIC9.03□□□□□ -0.96
CCDC27Q2M243 CCDC58P1-201ENST00000578567 430 ntBASIC9.03□□□□□ -0.96
CCDC27Q2M243 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC9.03□□□□□ -0.96
CCDC27Q2M243 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC9.03□□□□□ -0.96
CCDC27Q2M243 CLIC4P2-201ENST00000601934 717 ntBASIC9.03□□□□□ -0.96
CCDC27Q2M243 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC9.03□□□□□ -0.96
CCDC27Q2M243 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC9.03□□□□□ -0.96
CCDC27Q2M243 AC116165.3-201ENST00000614524 400 ntBASIC9.03□□□□□ -0.96
CCDC27Q2M243 AC140479.4-205ENST00000636339 820 ntBASIC9.03□□□□□ -0.96
CCDC27Q2M243 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CCDC27Q2M243 CCAT2-201ENST00000630920 1752 ntBASIC9.03□□□□□ -0.96
CCDC27Q2M243 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC9.03□□□□□ -0.96
CCDC27Q2M243 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
CCDC27Q2M243 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
CCDC27Q2M243 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CCDC27Q2M243 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC9.03□□□□□ -0.96
CCDC27Q2M243 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CCDC27Q2M243 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CCDC27Q2M243 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
CCDC27Q2M243 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
CCDC27Q2M243 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC9.02□□□□□ -0.96
CCDC27Q2M243 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
CCDC27Q2M243 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CCDC27Q2M243 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CCDC27Q2M243 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 TRIM53CP-201ENST00000531490 1354 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CCDC27Q2M243 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 AC104581.5-201ENST00000624171 7141 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CCDC27Q2M243 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CCDC27Q2M243 AC096992.2-201ENST00000609553 1684 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CCDC27Q2M243 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 OR10D1P-201ENST00000355343 936 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 ZNF37CP-201ENST00000406795 241 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 AL024507.1-201ENST00000412741 274 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 AC007563.3-201ENST00000433233 371 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 AC098826.2-201ENST00000452011 651 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 RPL36AP55-201ENST00000454114 305 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 AL354872.1-201ENST00000456361 967 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 RN7SL705P-201ENST00000481678 294 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 MTCYBP44-201ENST00000514835 823 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 IGHVII-51-2-201ENST00000519778 259 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 SOX5P1-201ENST00000524155 1127 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 OR56A7P-201ENST00000524865 941 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 AC005632.2-201ENST00000564271 828 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CCDC27Q2M243 RPS27AP19-201ENST00000597285 458 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CCDC27Q2M243 QTRT1P1-201ENST00000604344 1078 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 AC004908.1-201ENST00000606572 541 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 AL121985.3-201ENST00000620690 523 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 AC120057.5-201ENST00000623840 154 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 SNORA16A-202ENST00000628458 135 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CCDC27Q2M243 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CCDC27Q2M243 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CCDC27Q2M243 PARN-201ENST00000341484 2100 ntTSL 2 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 NCOA4P3-201ENST00000513203 1877 ntBASIC9.02□□□□□ -0.97
CCDC27Q2M243 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CCDC27Q2M243 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CCDC27Q2M243 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC9.02□□□□□ -0.97
CCDC27Q2M243 AC106754.1-201ENST00000562632 1513 ntBASIC9.01□□□□□ -0.97
CCDC27Q2M243 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CCDC27Q2M243 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC9.01□□□□□ -0.97
CCDC27Q2M243 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CCDC27Q2M243 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CCDC27Q2M243 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms