Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 IGLC4-201ENST00000517690 248 ntBASIC7.19□□□□□ -1.26
VCPP55072 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.19□□□□□ -1.26
VCPP55072 AC007537.1-201ENST00000539347 327 ntBASIC7.19□□□□□ -1.26
VCPP55072 TDGP1-201ENST00000543961 1229 ntBASIC7.19□□□□□ -1.26
VCPP55072 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.19□□□□□ -1.26
VCPP55072 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.19□□□□□ -1.26
VCPP55072 NPM1P45-201ENST00000583151 559 ntBASIC7.19□□□□□ -1.26
VCPP55072 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.19□□□□□ -1.26
VCPP55072 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VCPP55072 uc_338.31-201ENST00000615595 186 ntBASIC7.19□□□□□ -1.26
VCPP55072 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.19□□□□□ -1.26
VCPP55072 AP005212.3-201ENST00000619964 528 ntBASIC7.19□□□□□ -1.26
VCPP55072 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.19□□□□□ -1.26
VCPP55072 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.19□□□□□ -1.26
VCPP55072 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VCPP55072 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.19□□□□□ -1.26
VCPP55072 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
VCPP55072 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.19□□□□□ -1.26
VCPP55072 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
VCPP55072 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VCPP55072 MAPK10-270ENST00000641102 3538 ntBASIC7.19□□□□□ -1.26
VCPP55072 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.19□□□□□ -1.26
VCPP55072 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
VCPP55072 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.18□□□□□ -1.26
VCPP55072 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.18□□□□□ -1.26
VCPP55072 AC083806.2-201ENST00000617795 2685 ntBASIC7.18□□□□□ -1.26
VCPP55072 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
VCPP55072 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.18□□□□□ -1.26
VCPP55072 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.18□□□□□ -1.26
VCPP55072 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
VCPP55072 RBBP4P5-201ENST00000398583 1266 ntBASIC7.18□□□□□ -1.26
VCPP55072 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.18□□□□□ -1.26
VCPP55072 MIR541-201ENST00000401360 84 ntBASIC7.18□□□□□ -1.26
VCPP55072 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.18□□□□□ -1.26
VCPP55072 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.18□□□□□ -1.26
VCPP55072 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.18□□□□□ -1.26
VCPP55072 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.18□□□□□ -1.26
VCPP55072 AKR1D1P1-201ENST00000457236 936 ntBASIC7.18□□□□□ -1.26
VCPP55072 AC091874.2-201ENST00000505889 720 ntBASIC7.18□□□□□ -1.26
VCPP55072 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.18□□□□□ -1.26
VCPP55072 OR51A1P-201ENST00000511110 946 ntBASIC7.18□□□□□ -1.26
VCPP55072 RN7SKP196-201ENST00000516267 345 ntBASIC7.18□□□□□ -1.26
VCPP55072 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.18□□□□□ -1.26
VCPP55072 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.18□□□□□ -1.26
VCPP55072 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.18□□□□□ -1.26
VCPP55072 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
VCPP55072 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC7.18□□□□□ -1.26
VCPP55072 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.18□□□□□ -1.26
VCPP55072 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
VCPP55072 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.18□□□□□ -1.26
VCPP55072 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC7.18□□□□□ -1.26
VCPP55072 AC079414.3-201ENST00000612986 1090 ntBASIC7.18□□□□□ -1.26
VCPP55072 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.18□□□□□ -1.26
VCPP55072 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.18□□□□□ -1.26
VCPP55072 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.18□□□□□ -1.26
VCPP55072 AC010325.3-201ENST00000641084 394 ntBASIC7.18□□□□□ -1.26
VCPP55072 AC087269.2-201ENST00000641764 975 ntBASIC7.18□□□□□ -1.26
VCPP55072 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.18□□□□□ -1.26
VCPP55072 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.18□□□□□ -1.26
VCPP55072 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.18□□□□□ -1.26
VCPP55072 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 AC129502.1-201ENST00000623261 1654 ntBASIC7.18□□□□□ -1.26
VCPP55072 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 AC078880.4-201ENST00000617627 1749 ntBASIC7.18□□□□□ -1.26
VCPP55072 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
VCPP55072 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.18□□□□□ -1.26
VCPP55072 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VCPP55072 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
VCPP55072 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.17□□□□□ -1.26
VCPP55072 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VCPP55072 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VCPP55072 AC105114.1-201ENST00000624795 1862 ntBASIC7.17□□□□□ -1.26
VCPP55072 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
VCPP55072 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
VCPP55072 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VCPP55072 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
VCPP55072 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.17□□□□□ -1.26
VCPP55072 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
VCPP55072 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.17□□□□□ -1.26
VCPP55072 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
VCPP55072 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.17□□□□□ -1.26
VCPP55072 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VCPP55072 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.17□□□□□ -1.26
VCPP55072 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VCPP55072 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.17□□□□□ -1.26
VCPP55072 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms