Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LHX1P48742 AC099535.1-201ENST00000408928 371 ntBASIC6.92□□□□□ -1.3
LHX1P48742 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.92□□□□□ -1.3
LHX1P48742 AC017035.1-201ENST00000411999 1115 ntBASIC6.92□□□□□ -1.3
LHX1P48742 AL359885.1-201ENST00000415786 903 ntBASIC6.92□□□□□ -1.3
LHX1P48742 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.92□□□□□ -1.3
LHX1P48742 MED28P4-201ENST00000433137 572 ntBASIC6.92□□□□□ -1.3
LHX1P48742 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.92□□□□□ -1.3
LHX1P48742 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LHX1P48742 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.92□□□□□ -1.3
LHX1P48742 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.92□□□□□ -1.3
LHX1P48742 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.92□□□□□ -1.3
LHX1P48742 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.92□□□□□ -1.3
LHX1P48742 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.92□□□□□ -1.3
LHX1P48742 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.92□□□□□ -1.3
LHX1P48742 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.92□□□□□ -1.3
LHX1P48742 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.92□□□□□ -1.3
LHX1P48742 MIR5095-201ENST00000578844 88 ntBASIC6.92□□□□□ -1.3
LHX1P48742 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.92□□□□□ -1.3
LHX1P48742 AL078623.1-201ENST00000602702 907 ntBASIC6.92□□□□□ -1.3
LHX1P48742 AC139493.1-201ENST00000604368 397 ntBASIC6.92□□□□□ -1.3
LHX1P48742 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.92□□□□□ -1.3
LHX1P48742 AC010325.3-201ENST00000641084 394 ntBASIC6.92□□□□□ -1.3
LHX1P48742 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LHX1P48742 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.92□□□□□ -1.3
LHX1P48742 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LHX1P48742 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LHX1P48742 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.92□□□□□ -1.3
LHX1P48742 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LHX1P48742 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LHX1P48742 MAPK10-344ENST00000641718 3746 ntBASIC6.92□□□□□ -1.3
LHX1P48742 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.92□□□□□ -1.3
LHX1P48742 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.92□□□□□ -1.3
LHX1P48742 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LHX1P48742 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
LHX1P48742 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LHX1P48742 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
LHX1P48742 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LHX1P48742 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LHX1P48742 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LHX1P48742 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
LHX1P48742 EPS15P1-202ENST00000459691 2071 ntBASIC6.91□□□□□ -1.3
LHX1P48742 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LHX1P48742 LCOR-201ENST00000286067 4542 ntBASIC6.91□□□□□ -1.3
LHX1P48742 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.91□□□□□ -1.3
LHX1P48742 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LHX1P48742 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LHX1P48742 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.91□□□□□ -1.3
LHX1P48742 AC097359.1-201ENST00000447946 463 ntBASIC6.91□□□□□ -1.3
LHX1P48742 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LHX1P48742 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.91□□□□□ -1.3
LHX1P48742 RBMY2BP-202ENST00000451071 1156 ntBASIC6.91□□□□□ -1.3
LHX1P48742 RPS27P20-201ENST00000492051 246 ntBASIC6.91□□□□□ -1.3
LHX1P48742 AC093816.1-201ENST00000515076 913 ntBASIC6.91□□□□□ -1.3
LHX1P48742 CYCSP25-201ENST00000525280 316 ntBASIC6.91□□□□□ -1.3
LHX1P48742 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LHX1P48742 OR52K3P-201ENST00000531655 943 ntBASIC6.91□□□□□ -1.3
LHX1P48742 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LHX1P48742 AL359091.2-201ENST00000609303 556 ntBASIC6.91□□□□□ -1.3
LHX1P48742 AC016252.1-201ENST00000609721 474 ntBASIC6.91□□□□□ -1.3
LHX1P48742 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.91□□□□□ -1.3
LHX1P48742 AL596275.2-207ENST00000641188 675 ntBASIC6.91□□□□□ -1.3
LHX1P48742 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
LHX1P48742 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LHX1P48742 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LHX1P48742 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.91□□□□□ -1.3
LHX1P48742 AL137918.1-201ENST00000624542 1922 ntBASIC6.91□□□□□ -1.3
LHX1P48742 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
LHX1P48742 AC110597.1-201ENST00000562669 3176 ntBASIC6.91□□□□□ -1.3
LHX1P48742 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.91□□□□□ -1.3
LHX1P48742 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LHX1P48742 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.91□□□□□ -1.3
LHX1P48742 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
LHX1P48742 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
LHX1P48742 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
LHX1P48742 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LHX1P48742 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LHX1P48742 AC097634.1-201ENST00000604491 2467 ntBASIC6.9□□□□□ -1.3
LHX1P48742 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.9□□□□□ -1.3
LHX1P48742 AC025809.2-201ENST00000625085 1802 ntBASIC6.9□□□□□ -1.3
LHX1P48742 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LHX1P48742 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.9□□□□□ -1.3
LHX1P48742 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
LHX1P48742 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
LHX1P48742 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
LHX1P48742 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.9□□□□□ -1.3
LHX1P48742 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
LHX1P48742 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LHX1P48742 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
LHX1P48742 RNA5SP188-201ENST00000362916 129 ntBASIC6.9□□□□□ -1.3
LHX1P48742 YWHAZP4-201ENST00000392459 708 ntBASIC6.9□□□□□ -1.3
LHX1P48742 RPL21P50-201ENST00000417698 477 ntBASIC6.9□□□□□ -1.3
LHX1P48742 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
LHX1P48742 RPSAP32-201ENST00000432681 526 ntBASIC6.9□□□□□ -1.3
LHX1P48742 AC011742.2-201ENST00000443818 352 ntBASIC6.9□□□□□ -1.3
LHX1P48742 AC022415.1-202ENST00000486612 523 ntBASIC6.9□□□□□ -1.3
LHX1P48742 AC022206.1-201ENST00000495947 347 ntBASIC6.9□□□□□ -1.3
LHX1P48742 RN7SL649P-201ENST00000496974 275 ntBASIC6.9□□□□□ -1.3
LHX1P48742 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.9□□□□□ -1.3
LHX1P48742 SNORA58-201ENST00000505219 137 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms