Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC092032.1-201ENST00000603090 165 ntBASIC5.56□□□□□ -1.52
CDX1P47902 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.56□□□□□ -1.52
CDX1P47902 OR7M1P-201ENST00000608946 533 ntBASIC5.56□□□□□ -1.52
CDX1P47902 PTCHD3P1-201ENST00000612350 537 ntBASIC5.56□□□□□ -1.52
CDX1P47902 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.56□□□□□ -1.52
CDX1P47902 AC241377.1-201ENST00000619797 406 ntBASIC5.56□□□□□ -1.52
CDX1P47902 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC5.56□□□□□ -1.52
CDX1P47902 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 AC093909.5-201ENST00000621839 1799 ntBASIC5.56□□□□□ -1.52
CDX1P47902 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.56□□□□□ -1.52
CDX1P47902 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.56□□□□□ -1.52
CDX1P47902 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC5.56□□□□□ -1.52
CDX1P47902 HSPD1P8-201ENST00000400121 1658 ntBASIC5.56□□□□□ -1.52
CDX1P47902 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CDX1P47902 DOCK11P1-201ENST00000553480 5932 ntBASIC5.56□□□□□ -1.52
CDX1P47902 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDX1P47902 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.56□□□□□ -1.52
CDX1P47902 KARSP2-201ENST00000415696 1639 ntBASIC5.56□□□□□ -1.52
CDX1P47902 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.55□□□□□ -1.52
CDX1P47902 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC5.55□□□□□ -1.52
CDX1P47902 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CDX1P47902 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CDX1P47902 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDX1P47902 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.55□□□□□ -1.52
CDX1P47902 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDX1P47902 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDX1P47902 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CDX1P47902 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDX1P47902 RN7SKP55-201ENST00000364888 307 ntBASIC5.55□□□□□ -1.52
CDX1P47902 RN7SKP186-201ENST00000365371 303 ntBASIC5.55□□□□□ -1.52
CDX1P47902 MIR138-2-201ENST00000384916 84 ntBASIC5.55□□□□□ -1.52
CDX1P47902 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.55□□□□□ -1.52
CDX1P47902 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDX1P47902 AL356968.2-201ENST00000412769 1257 ntBASIC5.55□□□□□ -1.52
CDX1P47902 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.55□□□□□ -1.52
CDX1P47902 VN1R31P-201ENST00000417498 730 ntBASIC5.55□□□□□ -1.52
CDX1P47902 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC5.55□□□□□ -1.52
CDX1P47902 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.55□□□□□ -1.52
CDX1P47902 EIF4A1P5-201ENST00000428062 1095 ntBASIC5.55□□□□□ -1.52
CDX1P47902 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CDX1P47902 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.55□□□□□ -1.52
CDX1P47902 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.55□□□□□ -1.52
CDX1P47902 XKRYP6-201ENST00000440468 1116 ntBASIC5.55□□□□□ -1.52
CDX1P47902 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.55□□□□□ -1.52
CDX1P47902 XKRYP3-201ENST00000442113 1116 ntBASIC5.55□□□□□ -1.52
CDX1P47902 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC5.55□□□□□ -1.52
CDX1P47902 AL133480.2-201ENST00000456723 487 ntBASIC5.55□□□□□ -1.52
CDX1P47902 RN7SL797P-201ENST00000486314 297 ntBASIC5.55□□□□□ -1.52
CDX1P47902 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.55□□□□□ -1.52
CDX1P47902 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.55□□□□□ -1.52
CDX1P47902 PGAM4P2-201ENST00000512491 721 ntBASIC5.55□□□□□ -1.52
CDX1P47902 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.55□□□□□ -1.52
CDX1P47902 AC107952.1-201ENST00000524200 376 ntBASIC5.55□□□□□ -1.52
CDX1P47902 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC5.55□□□□□ -1.52
CDX1P47902 RGS5-220ENST00000528689 566 ntTSL 5 BASIC5.55□□□□□ -1.52
CDX1P47902 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.55□□□□□ -1.52
CDX1P47902 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC5.55□□□□□ -1.52
CDX1P47902 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.55□□□□□ -1.52
CDX1P47902 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC5.55□□□□□ -1.52
CDX1P47902 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDX1P47902 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.55□□□□□ -1.52
CDX1P47902 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC5.55□□□□□ -1.52
CDX1P47902 BNIP3P7-201ENST00000605641 516 ntBASIC5.55□□□□□ -1.52
CDX1P47902 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.55□□□□□ -1.52
CDX1P47902 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.55□□□□□ -1.52
CDX1P47902 MIR6774-201ENST00000614651 70 ntBASIC5.55□□□□□ -1.52
CDX1P47902 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.55□□□□□ -1.52
CDX1P47902 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.55□□□□□ -1.52
CDX1P47902 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDX1P47902 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.55□□□□□ -1.52
CDX1P47902 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDX1P47902 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
CDX1P47902 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDX1P47902 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.55□□□□□ -1.52
CDX1P47902 AC013488.1-201ENST00000526618 1838 ntBASIC5.55□□□□□ -1.52
CDX1P47902 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDX1P47902 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDX1P47902 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDX1P47902 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CDX1P47902 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC5.55□□□□□ -1.52
CDX1P47902 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDX1P47902 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC5.55□□□□□ -1.52
CDX1P47902 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.55□□□□□ -1.52
CDX1P47902 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC5.55□□□□□ -1.52
CDX1P47902 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.54□□□□□ -1.52
CDX1P47902 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.54□□□□□ -1.52
CDX1P47902 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.54□□□□□ -1.52
CDX1P47902 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
CDX1P47902 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDX1P47902 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms