Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SYN1P17600 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC7.56□□□□□ -1.2
SYN1P17600 XRCC6P5-201ENST00000435236 1795 ntBASIC7.56□□□□□ -1.2
SYN1P17600 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.56□□□□□ -1.2
SYN1P17600 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.56□□□□□ -1.2
SYN1P17600 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.56□□□□□ -1.2
SYN1P17600 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 OR51C1P-202ENST00000641159 1444 ntBASIC7.56□□□□□ -1.2
SYN1P17600 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 MRPS21P5-201ENST00000417885 231 ntBASIC7.56□□□□□ -1.2
SYN1P17600 RAC1P4-201ENST00000419413 579 ntBASIC7.56□□□□□ -1.2
SYN1P17600 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 MED6P1-201ENST00000439659 713 ntBASIC7.56□□□□□ -1.2
SYN1P17600 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 RAD1P2-201ENST00000446414 663 ntBASIC7.56□□□□□ -1.2
SYN1P17600 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC7.56□□□□□ -1.2
SYN1P17600 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.56□□□□□ -1.2
SYN1P17600 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC7.56□□□□□ -1.2
SYN1P17600 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC7.56□□□□□ -1.2
SYN1P17600 GTF2IP9-201ENST00000502460 301 ntBASIC7.56□□□□□ -1.2
SYN1P17600 AC010627.1-201ENST00000503819 1294 ntBASIC7.56□□□□□ -1.2
SYN1P17600 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC7.56□□□□□ -1.2
SYN1P17600 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 HMGN1P17-201ENST00000513734 295 ntBASIC7.56□□□□□ -1.2
SYN1P17600 SNORA26.10-201ENST00000516427 141 ntBASIC7.56□□□□□ -1.2
SYN1P17600 RNA5SP278-201ENST00000517055 102 ntBASIC7.56□□□□□ -1.2
SYN1P17600 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
SYN1P17600 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.56□□□□□ -1.2
SYN1P17600 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.56□□□□□ -1.2
SYN1P17600 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC7.56□□□□□ -1.2
SYN1P17600 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.56□□□□□ -1.2
SYN1P17600 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.56□□□□□ -1.2
SYN1P17600 DNAJC19P3-201ENST00000594491 331 ntBASIC7.56□□□□□ -1.2
SYN1P17600 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.56□□□□□ -1.2
SYN1P17600 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.56□□□□□ -1.2
SYN1P17600 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 AL512624.1-201ENST00000613638 469 ntBASIC7.56□□□□□ -1.2
SYN1P17600 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC7.56□□□□□ -1.2
SYN1P17600 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.56□□□□□ -1.2
SYN1P17600 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
SYN1P17600 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SYN1P17600 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.56□□□□□ -1.2
SYN1P17600 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
SYN1P17600 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SYN1P17600 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.56□□□□□ -1.2
SYN1P17600 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
SYN1P17600 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.56□□□□□ -1.2
SYN1P17600 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
SYN1P17600 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.56□□□□□ -1.2
SYN1P17600 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SYN1P17600 AC125603.4-201ENST00000621942 2699 ntBASIC7.55□□□□□ -1.2
SYN1P17600 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYN1P17600 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYN1P17600 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYN1P17600 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
SYN1P17600 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
SYN1P17600 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYN1P17600 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYN1P17600 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYN1P17600 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYN1P17600 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYN1P17600 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SYN1P17600 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.55□□□□□ -1.2
SYN1P17600 AC016582.1-202ENST00000636341 2982 ntBASIC7.55□□□□□ -1.2
SYN1P17600 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYN1P17600 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYN1P17600 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SYN1P17600 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SYN1P17600 PPIAP22-201ENST00000358455 498 ntBASIC7.55□□□□□ -1.2
SYN1P17600 RNA5SP510-201ENST00000364697 99 ntBASIC7.55□□□□□ -1.2
SYN1P17600 RNU6-650P-201ENST00000365658 111 ntBASIC7.55□□□□□ -1.2
SYN1P17600 UBBP1-201ENST00000392399 473 ntBASIC7.55□□□□□ -1.2
SYN1P17600 LYPLA1P3-201ENST00000402650 695 ntBASIC7.55□□□□□ -1.2
SYN1P17600 RNA5SP198-201ENST00000410376 127 ntBASIC7.55□□□□□ -1.2
SYN1P17600 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC7.55□□□□□ -1.2
SYN1P17600 AP001960.1-201ENST00000506494 658 ntBASIC7.55□□□□□ -1.2
SYN1P17600 AC093870.1-201ENST00000506837 213 ntBASIC7.55□□□□□ -1.2
SYN1P17600 AC113398.2-201ENST00000507630 558 ntBASIC7.55□□□□□ -1.2
SYN1P17600 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC7.55□□□□□ -1.2
SYN1P17600 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC7.55□□□□□ -1.2
SYN1P17600 AC022296.2-201ENST00000512424 202 ntBASIC7.55□□□□□ -1.2
SYN1P17600 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SYN1P17600 NANOGNBP2-201ENST00000544753 553 ntBASIC7.55□□□□□ -1.2
SYN1P17600 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.55□□□□□ -1.2
SYN1P17600 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.55□□□□□ -1.2
SYN1P17600 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.55□□□□□ -1.2
SYN1P17600 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms