Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
COL6A2P12110 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
COL6A2P12110 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
COL6A2P12110 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.06□□□□□ -1.28
COL6A2P12110 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.06□□□□□ -1.28
COL6A2P12110 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 AP000641.1-201ENST00000531988 1639 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.06□□□□□ -1.28
COL6A2P12110 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
COL6A2P12110 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
COL6A2P12110 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
COL6A2P12110 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
COL6A2P12110 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 SNORD15A-201ENST00000384214 148 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
COL6A2P12110 RNU6-298P-201ENST00000390888 96 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 ST13P16-201ENST00000401760 781 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 AL049545.1-201ENST00000401856 572 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 AL355615.1-201ENST00000406187 641 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 TEX41-203ENST00000420472 765 ntTSL 3 BASIC7.06□□□□□ -1.28
COL6A2P12110 FABP5P2-201ENST00000439042 408 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 AC007790.1-201ENST00000439081 782 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.06□□□□□ -1.28
COL6A2P12110 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC7.06□□□□□ -1.28
COL6A2P12110 RNFT1P2-201ENST00000443064 757 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 AC096754.1-201ENST00000508904 818 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC7.06□□□□□ -1.28
COL6A2P12110 AC106800.2-201ENST00000514009 1103 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
COL6A2P12110 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC7.06□□□□□ -1.28
COL6A2P12110 AC092868.3-201ENST00000560515 784 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 AP000436.1-201ENST00000605239 800 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 AC104184.1-201ENST00000607513 721 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 AC023310.4-201ENST00000613130 650 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 RN7SL820P-201ENST00000616437 299 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
COL6A2P12110 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC7.06□□□□□ -1.28
COL6A2P12110 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 AC017104.5-201ENST00000637647 639 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC7.06□□□□□ -1.28
COL6A2P12110 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.06□□□□□ -1.28
COL6A2P12110 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC7.06□□□□□ -1.28
COL6A2P12110 AC092701.1-201ENST00000623627 1551 ntBASIC7.06□□□□□ -1.28
COL6A2P12110 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.06□□□□□ -1.28
COL6A2P12110 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.06□□□□□ -1.28
COL6A2P12110 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.06□□□□□ -1.28
COL6A2P12110 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL6A2P12110 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.05□□□□□ -1.28
COL6A2P12110 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL6A2P12110 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL6A2P12110 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.05□□□□□ -1.28
COL6A2P12110 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.05□□□□□ -1.28
COL6A2P12110 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL6A2P12110 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL6A2P12110 RPL10P16-201ENST00000325000 645 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL6A2P12110 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL6A2P12110 RNU6-697P-201ENST00000363348 107 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC7.05□□□□□ -1.28
COL6A2P12110 HMGB3P19-201ENST00000403971 560 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC7.05□□□□□ -1.28
COL6A2P12110 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL6A2P12110 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC7.05□□□□□ -1.28
COL6A2P12110 BX664727.1-201ENST00000416024 466 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.05□□□□□ -1.28
COL6A2P12110 RPSAP59-201ENST00000421048 890 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 FECHP1-201ENST00000431896 1214 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 RPSAP62-201ENST00000432596 833 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 RPL7P34-201ENST00000433316 712 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.05□□□□□ -1.28
COL6A2P12110 RN7SL791P-201ENST00000467868 295 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL6A2P12110 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL6A2P12110 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC7.05□□□□□ -1.28
COL6A2P12110 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC7.05□□□□□ -1.28
COL6A2P12110 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC7.05□□□□□ -1.28
COL6A2P12110 AP001207.2-201ENST00000519490 539 ntBASIC7.05□□□□□ -1.28
COL6A2P12110 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC7.05□□□□□ -1.28
COL6A2P12110 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC7.05□□□□□ -1.28
COL6A2P12110 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL6A2P12110 AC023825.1-201ENST00000566704 1030 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms