Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RETP07949 MAPK10-344ENST00000641718 3746 ntBASIC6.78□□□□□ -1.32
RETP07949 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
RETP07949 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
RETP07949 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RETP07949 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.78□□□□□ -1.32
RETP07949 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.78□□□□□ -1.32
RETP07949 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
RETP07949 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.78□□□□□ -1.32
RETP07949 VN1R66P-201ENST00000412929 916 ntBASIC6.78□□□□□ -1.32
RETP07949 Z68694.1-201ENST00000413929 841 ntBASIC6.78□□□□□ -1.32
RETP07949 RPL17P17-201ENST00000419491 557 ntBASIC6.78□□□□□ -1.32
RETP07949 AL391987.1-201ENST00000441025 200 ntBASIC6.78□□□□□ -1.32
RETP07949 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.78□□□□□ -1.32
RETP07949 AL034399.1-201ENST00000451535 380 ntBASIC6.78□□□□□ -1.32
RETP07949 BZW1P1-201ENST00000454901 1240 ntBASIC6.78□□□□□ -1.32
RETP07949 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.78□□□□□ -1.32
RETP07949 RN7SL160P-201ENST00000468558 284 ntBASIC6.78□□□□□ -1.32
RETP07949 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RETP07949 RN7SL379P-201ENST00000479912 293 ntBASIC6.78□□□□□ -1.32
RETP07949 AC093719.1-201ENST00000480427 441 ntBASIC6.78□□□□□ -1.32
RETP07949 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.78□□□□□ -1.32
RETP07949 RPS4XP23-201ENST00000487801 237 ntBASIC6.78□□□□□ -1.32
RETP07949 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.78□□□□□ -1.32
RETP07949 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.78□□□□□ -1.32
RETP07949 AC135983.3-201ENST00000528049 1226 ntBASIC6.78□□□□□ -1.32
RETP07949 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.78□□□□□ -1.32
RETP07949 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.78□□□□□ -1.32
RETP07949 AC011445.2-201ENST00000599274 173 ntBASIC6.78□□□□□ -1.32
RETP07949 AC114477.1-201ENST00000605097 605 ntBASIC6.78□□□□□ -1.32
RETP07949 AC104184.1-201ENST00000607513 721 ntBASIC6.78□□□□□ -1.32
RETP07949 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
RETP07949 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RETP07949 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.78□□□□□ -1.32
RETP07949 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RETP07949 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.78□□□□□ -1.32
RETP07949 AC104966.1-201ENST00000467010 1464 ntBASIC6.78□□□□□ -1.32
RETP07949 CYP2G2P-201ENST00000594920 1485 ntBASIC6.78□□□□□ -1.32
RETP07949 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RETP07949 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.78□□□□□ -1.32
RETP07949 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
RETP07949 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
RETP07949 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.77□□□□□ -1.32
RETP07949 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.77□□□□□ -1.33
RETP07949 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RETP07949 AP002800.1-201ENST00000624982 2225 ntBASIC6.77□□□□□ -1.33
RETP07949 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.77□□□□□ -1.33
RETP07949 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RETP07949 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.77□□□□□ -1.33
RETP07949 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RETP07949 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
RETP07949 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RETP07949 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
RETP07949 AP003175.1-201ENST00000641383 6658 ntBASIC6.77□□□□□ -1.33
RETP07949 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.77□□□□□ -1.33
RETP07949 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
RETP07949 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RETP07949 RNA5SP77-201ENST00000365394 120 ntBASIC6.77□□□□□ -1.33
RETP07949 MIR188-201ENST00000385034 86 ntBASIC6.77□□□□□ -1.33
RETP07949 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.77□□□□□ -1.33
RETP07949 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.77□□□□□ -1.33
RETP07949 DUTP4-201ENST00000424782 475 ntBASIC6.77□□□□□ -1.33
RETP07949 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.77□□□□□ -1.33
RETP07949 AMYP1-201ENST00000440059 1023 ntBASIC6.77□□□□□ -1.33
RETP07949 RN7SL254P-201ENST00000460609 284 ntBASIC6.77□□□□□ -1.33
RETP07949 RN7SL39P-201ENST00000462264 297 ntBASIC6.77□□□□□ -1.33
RETP07949 RPS14P8-201ENST00000478778 369 ntBASIC6.77□□□□□ -1.33
RETP07949 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.77□□□□□ -1.33
RETP07949 AC093870.1-201ENST00000506837 213 ntBASIC6.77□□□□□ -1.33
RETP07949 AC106872.4-201ENST00000510050 523 ntBASIC6.77□□□□□ -1.33
RETP07949 SNX18P23-201ENST00000510867 677 ntBASIC6.77□□□□□ -1.33
RETP07949 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.77□□□□□ -1.33
RETP07949 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.77□□□□□ -1.33
RETP07949 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.77□□□□□ -1.33
RETP07949 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RETP07949 SNRPCP6-201ENST00000528310 210 ntBASIC6.77□□□□□ -1.33
RETP07949 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.77□□□□□ -1.33
RETP07949 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.77□□□□□ -1.33
RETP07949 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.77□□□□□ -1.33
RETP07949 AC124916.2-201ENST00000604416 224 ntBASIC6.77□□□□□ -1.33
RETP07949 AL590032.1-201ENST00000604920 252 ntBASIC6.77□□□□□ -1.33
RETP07949 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RETP07949 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.77□□□□□ -1.33
RETP07949 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.77□□□□□ -1.33
RETP07949 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.77□□□□□ -1.33
RETP07949 AL354702.2-202ENST00000641481 890 ntBASIC6.77□□□□□ -1.33
RETP07949 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.77□□□□□ -1.33
RETP07949 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RETP07949 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
RETP07949 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
RETP07949 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RETP07949 AC010401.2-201ENST00000575137 4934 ntBASIC6.77□□□□□ -1.33
RETP07949 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RETP07949 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RETP07949 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RETP07949 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.77□□□□□ -1.33
RETP07949 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RETP07949 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RETP07949 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.76□□□□□ -1.33
RETP07949 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms