Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 OR7E99P-201ENST00000505750 922 ntBASIC9.48□□□□□ -0.89
HFM1A2PYH4 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 AC005332.4-201ENST00000592752 579 ntBASIC9.48□□□□□ -0.89
HFM1A2PYH4 SNORA74.4-201ENST00000607595 199 ntBASIC9.48□□□□□ -0.89
HFM1A2PYH4 MIR6862-1-201ENST00000613016 70 ntBASIC9.48□□□□□ -0.89
HFM1A2PYH4 MIR6862-2-201ENST00000614755 70 ntBASIC9.48□□□□□ -0.89
HFM1A2PYH4 MIR7159-201ENST00000620587 66 ntBASIC9.48□□□□□ -0.89
HFM1A2PYH4 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
HFM1A2PYH4 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
HFM1A2PYH4 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
HFM1A2PYH4 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
HFM1A2PYH4 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
HFM1A2PYH4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
HFM1A2PYH4 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
HFM1A2PYH4 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
HFM1A2PYH4 ZSWIM5P3-201ENST00000511265 2743 ntBASIC9.48□□□□□ -0.89
HFM1A2PYH4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 RNA5SP110-201ENST00000362638 115 ntBASIC9.48□□□□□ -0.89
HFM1A2PYH4 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
HFM1A2PYH4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
HFM1A2PYH4 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
HFM1A2PYH4 MGAT2P1-201ENST00000449718 797 ntBASIC9.48□□□□□ -0.89
HFM1A2PYH4 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 AC091965.3-201ENST00000506236 208 ntBASIC9.48□□□□□ -0.89
HFM1A2PYH4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
HFM1A2PYH4 AP001858.2-201ENST00000536213 601 ntBASIC9.48□□□□□ -0.89
HFM1A2PYH4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
HFM1A2PYH4 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC9.48□□□□□ -0.89
HFM1A2PYH4 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC9.48□□□□□ -0.89
HFM1A2PYH4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
HFM1A2PYH4 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
HFM1A2PYH4 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
HFM1A2PYH4 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC9.47□□□□□ -0.89
HFM1A2PYH4 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC9.47□□□□□ -0.89
HFM1A2PYH4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC9.47□□□□□ -0.89
HFM1A2PYH4 CREM-217ENST00000439705 2306 ntTSL 5 BASIC9.47□□□□□ -0.89
HFM1A2PYH4 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
HFM1A2PYH4 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 AC097721.1-201ENST00000427150 1253 ntBASIC9.47□□□□□ -0.89
HFM1A2PYH4 AC108479.1-201ENST00000431142 427 ntBASIC9.47□□□□□ -0.89
HFM1A2PYH4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC9.47□□□□□ -0.89
HFM1A2PYH4 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC9.47□□□□□ -0.89
HFM1A2PYH4 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC9.47□□□□□ -0.89
HFM1A2PYH4 AC009120.3-201ENST00000563335 499 ntBASIC9.47□□□□□ -0.89
HFM1A2PYH4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC9.47□□□□□ -0.89
HFM1A2PYH4 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC9.47□□□□□ -0.89
HFM1A2PYH4 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
HFM1A2PYH4 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
HFM1A2PYH4 AL136531.3-201ENST00000624378 3658 ntBASIC9.46□□□□□ -0.89
HFM1A2PYH4 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
HFM1A2PYH4 AL591848.4-201ENST00000567832 3472 ntBASIC9.46□□□□□ -0.89
HFM1A2PYH4 SELE-203ENST00000367775 3389 ntTSL 5 BASIC9.46□□□□□ -0.89
HFM1A2PYH4 AC092111.1-201ENST00000618256 3358 ntBASIC9.46□□□□□ -0.89
HFM1A2PYH4 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
HFM1A2PYH4 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
HFM1A2PYH4 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
HFM1A2PYH4 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
HFM1A2PYH4 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
HFM1A2PYH4 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
HFM1A2PYH4 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC9.46□□□□□ -0.9
HFM1A2PYH4 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
HFM1A2PYH4 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
HFM1A2PYH4 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC9.46□□□□□ -0.9
HFM1A2PYH4 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC9.46□□□□□ -0.9
HFM1A2PYH4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC9.46□□□□□ -0.9
HFM1A2PYH4 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC9.46□□□□□ -0.9
HFM1A2PYH4 SNX18P26-201ENST00000458433 740 ntBASIC9.46□□□□□ -0.9
HFM1A2PYH4 RN7SL326P-201ENST00000477493 296 ntBASIC9.46□□□□□ -0.9
HFM1A2PYH4 AC106800.3-201ENST00000511389 308 ntBASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 347.1 ms