Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 REXO1L12P-201ENST00000622156 912 ntBASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB11Q9Y5F2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 ECEL1P3-201ENST00000427961 737 ntBASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 AL162377.1-201ENST00000618844 1793 ntBASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB11Q9Y5F2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 AL390719.1-204ENST00000412397 1219 ntBASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 AC023632.3-201ENST00000521633 145 ntBASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 AC233263.1-201ENST00000578059 224 ntBASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 KRT17P2-201ENST00000300992 1314 ntBASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHB11Q9Y5F2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHB11Q9Y5F2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms