Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SATB2Q9UPW6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SATB2Q9UPW6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 AC073130.3-201ENST00000624389 2278 ntBASIC19.37■□□□□ 0.69
SATB2Q9UPW6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 AC097493.4-201ENST00000641197 219 ntBASIC19.37■□□□□ 0.69
SATB2Q9UPW6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SATB2Q9UPW6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 RCN1P1-201ENST00000400413 996 ntBASIC19.36■□□□□ 0.69
SATB2Q9UPW6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
SATB2Q9UPW6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SATB2Q9UPW6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.35■□□□□ 0.69
SATB2Q9UPW6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SATB2Q9UPW6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SATB2Q9UPW6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SATB2Q9UPW6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SATB2Q9UPW6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.35■□□□□ 0.69
SATB2Q9UPW6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
SATB2Q9UPW6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SATB2Q9UPW6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SATB2Q9UPW6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SATB2Q9UPW6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms