Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA7Q9UN72 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PCDHA7Q9UN72 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA7Q9UN72 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA7Q9UN72 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHA7Q9UN72 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHA7Q9UN72 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHA7Q9UN72 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA7Q9UN72 AC023632.3-201ENST00000521633 145 ntBASIC22.54■■□□□ 1.2
PCDHA7Q9UN72 AC005181.1-201ENST00000604782 1256 ntBASIC22.54■■□□□ 1.2
PCDHA7Q9UN72 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHA7Q9UN72 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA7Q9UN72 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
PCDHA7Q9UN72 AP000974.1-201ENST00000623909 2387 ntBASIC22.54■■□□□ 1.2
PCDHA7Q9UN72 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA7Q9UN72 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHA7Q9UN72 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 AC092437.1-201ENST00000624794 1048 ntBASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 PHGDH-210ENST00000641115 1638 ntBASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA7Q9UN72 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PCDHA7Q9UN72 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
PCDHA7Q9UN72 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 Z82202.1-201ENST00000623446 1880 ntBASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHA7Q9UN72 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA7Q9UN72 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA7Q9UN72 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA7Q9UN72 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA7Q9UN72 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
PCDHA7Q9UN72 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA7Q9UN72 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PCDHA7Q9UN72 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHA7Q9UN72 RNF165-205ENST00000588679 2904 ntBASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms