Protein–RNA interactions for Protein: Q9UMS4

PRPF19, Pre-mRNA-processing factor 19, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19Q9UMS4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRPF19Q9UMS4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRPF19Q9UMS4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PRPF19Q9UMS4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.92■□□□□ 0.62
PRPF19Q9UMS4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PRPF19Q9UMS4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRPF19Q9UMS4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
PRPF19Q9UMS4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.92■□□□□ 0.62
PRPF19Q9UMS4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRPF19Q9UMS4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRPF19Q9UMS4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 AL358852.1-201ENST00000623174 1268 ntBASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRPF19Q9UMS4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 TPRG1LP1-201ENST00000598702 760 ntBASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PRPF19Q9UMS4 AP001271.2-201ENST00000624018 1556 ntBASIC18.89■□□□□ 0.62
PRPF19Q9UMS4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.89■□□□□ 0.62
PRPF19Q9UMS4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 AC091799.1-201ENST00000422823 811 ntBASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 AC010141.2-201ENST00000452426 721 ntBASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRPF19Q9UMS4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.88■□□□□ 0.61
PRPF19Q9UMS4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF19Q9UMS4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF19Q9UMS4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRPF19Q9UMS4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms