Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOMER3Q9NSC5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOMER3Q9NSC5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOMER3Q9NSC5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.64■□□□□ 0.89
HOMER3Q9NSC5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.64■□□□□ 0.89
HOMER3Q9NSC5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOMER3Q9NSC5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.64■□□□□ 0.89
HOMER3Q9NSC5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.64■□□□□ 0.89
HOMER3Q9NSC5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.64■□□□□ 0.89
HOMER3Q9NSC5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOMER3Q9NSC5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HOMER3Q9NSC5 AP001271.2-201ENST00000624018 1556 ntBASIC20.63■□□□□ 0.89
HOMER3Q9NSC5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.63■□□□□ 0.89
HOMER3Q9NSC5 KRT8P20-201ENST00000423953 1409 ntBASIC20.63■□□□□ 0.89
HOMER3Q9NSC5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOMER3Q9NSC5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.63■□□□□ 0.89
HOMER3Q9NSC5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOMER3Q9NSC5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
HOMER3Q9NSC5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOMER3Q9NSC5 ZNRF2P3-201ENST00000424200 374 ntBASIC20.63■□□□□ 0.89
HOMER3Q9NSC5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.63■□□□□ 0.89
HOMER3Q9NSC5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.63■□□□□ 0.89
HOMER3Q9NSC5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOMER3Q9NSC5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.63■□□□□ 0.89
HOMER3Q9NSC5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 AC016405.3-201ENST00000607710 860 ntBASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.62■□□□□ 0.89
HOMER3Q9NSC5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOMER3Q9NSC5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HOMER3Q9NSC5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HOMER3Q9NSC5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HOMER3Q9NSC5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOMER3Q9NSC5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HOMER3Q9NSC5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOMER3Q9NSC5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.61■□□□□ 0.89
HOMER3Q9NSC5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOMER3Q9NSC5 AC034268.1-201ENST00000441047 882 ntBASIC20.61■□□□□ 0.89
HOMER3Q9NSC5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.61■□□□□ 0.89
HOMER3Q9NSC5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.61■□□□□ 0.89
HOMER3Q9NSC5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOMER3Q9NSC5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOMER3Q9NSC5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOMER3Q9NSC5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HOMER3Q9NSC5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOMER3Q9NSC5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOMER3Q9NSC5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.6■□□□□ 0.89
HOMER3Q9NSC5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOMER3Q9NSC5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOMER3Q9NSC5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HOMER3Q9NSC5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOMER3Q9NSC5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
HOMER3Q9NSC5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HOMER3Q9NSC5 RARRES2P4-201ENST00000514074 484 ntBASIC20.6■□□□□ 0.89
HOMER3Q9NSC5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HOMER3Q9NSC5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
HOMER3Q9NSC5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
HOMER3Q9NSC5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HOMER3Q9NSC5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 AP000974.1-201ENST00000623909 2387 ntBASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 HLA-G-202ENST00000376815 851 ntBASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 HLA-G-203ENST00000376818 1127 ntBASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.59■□□□□ 0.89
HOMER3Q9NSC5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOMER3Q9NSC5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.58■□□□□ 0.89
HOMER3Q9NSC5 Z82202.1-201ENST00000623446 1880 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms