Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PDLIM7Q9NR12 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.3■■□□□ 1.16
PDLIM7Q9NR12 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDLIM7Q9NR12 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.3■■□□□ 1.16
PDLIM7Q9NR12 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDLIM7Q9NR12 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PDLIM7Q9NR12 FITM1-202ENST00000559294 800 ntBASIC22.3■■□□□ 1.16
PDLIM7Q9NR12 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
PDLIM7Q9NR12 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDLIM7Q9NR12 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.3■■□□□ 1.16
PDLIM7Q9NR12 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.3■■□□□ 1.16
PDLIM7Q9NR12 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDLIM7Q9NR12 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDLIM7Q9NR12 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
PDLIM7Q9NR12 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.29■■□□□ 1.16
PDLIM7Q9NR12 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC22.29■■□□□ 1.16
PDLIM7Q9NR12 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PDLIM7Q9NR12 AC104076.2-201ENST00000448912 469 ntBASIC22.29■■□□□ 1.16
PDLIM7Q9NR12 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDLIM7Q9NR12 AC092720.2-201ENST00000602388 1665 ntBASIC22.29■■□□□ 1.16
PDLIM7Q9NR12 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
PDLIM7Q9NR12 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
PDLIM7Q9NR12 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDLIM7Q9NR12 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 AP002982.1-201ENST00000492365 877 ntBASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 TMA16-209ENST00000513272 803 ntTSL 2 BASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 AC087388.1-201ENST00000571370 1112 ntBASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.28■■□□□ 1.16
PDLIM7Q9NR12 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PDLIM7Q9NR12 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDLIM7Q9NR12 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.27■■□□□ 1.16
PDLIM7Q9NR12 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDLIM7Q9NR12 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDLIM7Q9NR12 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PDLIM7Q9NR12 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDLIM7Q9NR12 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PDLIM7Q9NR12 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.27■■□□□ 1.16
PDLIM7Q9NR12 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.27■■□□□ 1.16
PDLIM7Q9NR12 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.27■■□□□ 1.16
PDLIM7Q9NR12 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.27■■□□□ 1.16
PDLIM7Q9NR12 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.27■■□□□ 1.16
PDLIM7Q9NR12 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.27■■□□□ 1.15
PDLIM7Q9NR12 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM7Q9NR12 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM7Q9NR12 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM7Q9NR12 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.26■■□□□ 1.15
PDLIM7Q9NR12 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM7Q9NR12 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PDLIM7Q9NR12 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM7Q9NR12 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.26■■□□□ 1.15
PDLIM7Q9NR12 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.26■■□□□ 1.15
PDLIM7Q9NR12 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM7Q9NR12 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.26■■□□□ 1.15
PDLIM7Q9NR12 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM7Q9NR12 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM7Q9NR12 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM7Q9NR12 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM7Q9NR12 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM7Q9NR12 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.25■■□□□ 1.15
PDLIM7Q9NR12 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDLIM7Q9NR12 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.25■■□□□ 1.15
PDLIM7Q9NR12 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDLIM7Q9NR12 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.25■■□□□ 1.15
PDLIM7Q9NR12 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.25■■□□□ 1.15
PDLIM7Q9NR12 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.25■■□□□ 1.15
PDLIM7Q9NR12 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.25■■□□□ 1.15
PDLIM7Q9NR12 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
PDLIM7Q9NR12 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 DPP3P2-201ENST00000416030 1696 ntBASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 AC116562.2-201ENST00000507042 360 ntBASIC22.24■■□□□ 1.15
PDLIM7Q9NR12 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms