Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.07■■□□□ 1.12
ATP6V0A4Q9HBG4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.07■■□□□ 1.12
ATP6V0A4Q9HBG4 AL023875.1-201ENST00000640777 796 ntBASIC22.07■■□□□ 1.12
ATP6V0A4Q9HBG4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V0A4Q9HBG4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V0A4Q9HBG4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
ATP6V0A4Q9HBG4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V0A4Q9HBG4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ATP6V0A4Q9HBG4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 AC239809.2-201ENST00000415381 517 ntBASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 PRKY-204ENST00000533551 1019 ntBASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 AL512408.1-201ENST00000569378 2000 ntBASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
ATP6V0A4Q9HBG4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 BX119927.1-201ENST00000636596 1552 ntBASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 AC124016.1-201ENST00000609552 612 ntBASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ATP6V0A4Q9HBG4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 AC133681.1-201ENST00000465482 601 ntBASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.04■■□□□ 1.12
ATP6V0A4Q9HBG4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.03■■□□□ 1.12
ATP6V0A4Q9HBG4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0A4Q9HBG4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0A4Q9HBG4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0A4Q9HBG4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.03■■□□□ 1.12
ATP6V0A4Q9HBG4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0A4Q9HBG4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0A4Q9HBG4 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.03■■□□□ 1.12
ATP6V0A4Q9HBG4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.03■■□□□ 1.12
ATP6V0A4Q9HBG4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
ATP6V0A4Q9HBG4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.03■■□□□ 1.12
ATP6V0A4Q9HBG4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0A4Q9HBG4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0A4Q9HBG4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V0A4Q9HBG4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.03■■□□□ 1.12
ATP6V0A4Q9HBG4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
ATP6V0A4Q9HBG4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.02■■□□□ 1.12
ATP6V0A4Q9HBG4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V0A4Q9HBG4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
ATP6V0A4Q9HBG4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.02■■□□□ 1.12
ATP6V0A4Q9HBG4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V0A4Q9HBG4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V0A4Q9HBG4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V0A4Q9HBG4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V0A4Q9HBG4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.02■■□□□ 1.12
ATP6V0A4Q9HBG4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V0A4Q9HBG4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V0A4Q9HBG4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V0A4Q9HBG4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms