Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.54■□□□□ 0.88
BRD9Q9H8M2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 KRT16P1-201ENST00000399124 1418 ntBASIC20.53■□□□□ 0.88
BRD9Q9H8M2 KRT8P20-201ENST00000423953 1409 ntBASIC20.53■□□□□ 0.88
BRD9Q9H8M2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 NIFKP9-201ENST00000419265 221 ntBASIC20.53■□□□□ 0.88
BRD9Q9H8M2 AL390955.1-201ENST00000428694 934 ntBASIC20.53■□□□□ 0.88
BRD9Q9H8M2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.53■□□□□ 0.88
BRD9Q9H8M2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRD9Q9H8M2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
BRD9Q9H8M2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRD9Q9H8M2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.52■□□□□ 0.88
BRD9Q9H8M2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.52■□□□□ 0.88
BRD9Q9H8M2 AC116562.2-201ENST00000507042 360 ntBASIC20.52■□□□□ 0.88
BRD9Q9H8M2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRD9Q9H8M2 KRT18P22-201ENST00000402024 1347 ntBASIC20.52■□□□□ 0.87
BRD9Q9H8M2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 AC113347.1-201ENST00000413321 391 ntBASIC20.51■□□□□ 0.87
BRD9Q9H8M2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 KRT18P57-201ENST00000443599 1254 ntBASIC20.51■□□□□ 0.87
BRD9Q9H8M2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 PTBP1P-201ENST00000554374 1601 ntBASIC20.51■□□□□ 0.87
BRD9Q9H8M2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRD9Q9H8M2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 FITM1-202ENST00000559294 800 ntBASIC20.5■□□□□ 0.87
BRD9Q9H8M2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
BRD9Q9H8M2 CYP2D8P-201ENST00000433633 1490 ntBASIC20.5■□□□□ 0.87
BRD9Q9H8M2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.49■□□□□ 0.87
BRD9Q9H8M2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRD9Q9H8M2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
BRD9Q9H8M2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.49■□□□□ 0.87
BRD9Q9H8M2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRD9Q9H8M2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.49■□□□□ 0.87
BRD9Q9H8M2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.49■□□□□ 0.87
BRD9Q9H8M2 AL137013.1-201ENST00000432946 1228 ntBASIC20.49■□□□□ 0.87
BRD9Q9H8M2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.49■□□□□ 0.87
BRD9Q9H8M2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRD9Q9H8M2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRD9Q9H8M2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.49■□□□□ 0.87
BRD9Q9H8M2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRD9Q9H8M2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRD9Q9H8M2 AL137060.1-201ENST00000618151 2648 ntBASIC20.49■□□□□ 0.87
BRD9Q9H8M2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
BRD9Q9H8M2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BRD9Q9H8M2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms