Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN3Q9H347 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN3Q9H347 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN3Q9H347 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.38■□□□□ 0.53
UBQLN3Q9H347 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
UBQLN3Q9H347 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN3Q9H347 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBQLN3Q9H347 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.38■□□□□ 0.53
UBQLN3Q9H347 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
UBQLN3Q9H347 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 UNC93B4-201ENST00000505679 747 ntBASIC18.36■□□□□ 0.53
UBQLN3Q9H347 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN3Q9H347 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.35■□□□□ 0.53
UBQLN3Q9H347 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN3Q9H347 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN3Q9H347 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms