Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.06■□□□□ 0.16
NKX6-2Q9C056 AL117332.1-201ENST00000622628 974 ntBASIC16.06■□□□□ 0.16
NKX6-2Q9C056 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.06■□□□□ 0.16
NKX6-2Q9C056 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NKX6-2Q9C056 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
NKX6-2Q9C056 AC124067.4-201ENST00000519691 2379 ntBASIC16.06■□□□□ 0.16
NKX6-2Q9C056 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NKX6-2Q9C056 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.06■□□□□ 0.16
NKX6-2Q9C056 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NKX6-2Q9C056 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NKX6-2Q9C056 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NKX6-2Q9C056 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NKX6-2Q9C056 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NKX6-2Q9C056 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NKX6-2Q9C056 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NKX6-2Q9C056 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 OR2I1P-207ENST00000453522 948 ntBASIC16.04■□□□□ 0.16
NKX6-2Q9C056 KRT125P-201ENST00000546827 989 ntBASIC16.04■□□□□ 0.16
NKX6-2Q9C056 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NKX6-2Q9C056 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 AC141586.5-201ENST00000624546 2050 ntBASIC16.03■□□□□ 0.16
NKX6-2Q9C056 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NKX6-2Q9C056 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NKX6-2Q9C056 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NKX6-2Q9C056 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NKX6-2Q9C056 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.02■□□□□ 0.16
NKX6-2Q9C056 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NKX6-2Q9C056 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms