Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 TSPY7P-201ENST00000431358 1114 ntBASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 MIR4785-201ENST00000585005 73 ntBASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
TRAIPQ9BWF2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
TRAIPQ9BWF2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 AL353807.1-201ENST00000427475 662 ntBASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAIPQ9BWF2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 KRT8P17-201ENST00000453110 1448 ntBASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 AF186192.3-201ENST00000583427 947 ntBASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 LINC01006-201ENST00000333319 2292 ntBASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 AC006128.1-201ENST00000624704 1661 ntBASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAIPQ9BWF2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms