Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 AC098590.1-201ENST00000468126 897 ntBASIC13.78□□□□□ -0.2
UPK3BQ9BT76 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 AC120498.8-201ENST00000614275 531 ntBASIC13.78□□□□□ -0.2
UPK3BQ9BT76 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 AC026310.3-201ENST00000625186 2373 ntBASIC13.78□□□□□ -0.2
UPK3BQ9BT76 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
UPK3BQ9BT76 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
UPK3BQ9BT76 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
UPK3BQ9BT76 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
UPK3BQ9BT76 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 HLA-G-202ENST00000376815 851 ntBASIC13.76□□□□□ -0.21
UPK3BQ9BT76 HLA-G-203ENST00000376818 1127 ntBASIC13.76□□□□□ -0.21
UPK3BQ9BT76 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 AC142381.4-202ENST00000563973 229 ntBASIC13.76□□□□□ -0.21
UPK3BQ9BT76 RN7SL471P-201ENST00000580476 299 ntBASIC13.76□□□□□ -0.21
UPK3BQ9BT76 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 AP006294.2-201ENST00000641667 209 ntBASIC13.76□□□□□ -0.21
UPK3BQ9BT76 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK3BQ9BT76 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK3BQ9BT76 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms