Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.1■□□□□ 0.97
TWNKQ96RR1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.1■□□□□ 0.97
TWNKQ96RR1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TWNKQ96RR1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.1■□□□□ 0.97
TWNKQ96RR1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TWNKQ96RR1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.1■□□□□ 0.97
TWNKQ96RR1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.1■□□□□ 0.97
TWNKQ96RR1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TWNKQ96RR1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TWNKQ96RR1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TWNKQ96RR1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.1■□□□□ 0.97
TWNKQ96RR1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.1■□□□□ 0.97
TWNKQ96RR1 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.09■□□□□ 0.97
TWNKQ96RR1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.09■□□□□ 0.97
TWNKQ96RR1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.09■□□□□ 0.97
TWNKQ96RR1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
TWNKQ96RR1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TWNKQ96RR1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TWNKQ96RR1 KRT18P29-201ENST00000397031 1267 ntBASIC21.09■□□□□ 0.97
TWNKQ96RR1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TWNKQ96RR1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.09■□□□□ 0.97
TWNKQ96RR1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
TWNKQ96RR1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.09■□□□□ 0.97
TWNKQ96RR1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
TWNKQ96RR1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
TWNKQ96RR1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TWNKQ96RR1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TWNKQ96RR1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TWNKQ96RR1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.09■□□□□ 0.97
TWNKQ96RR1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TWNKQ96RR1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TWNKQ96RR1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
TWNKQ96RR1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.08■□□□□ 0.97
TWNKQ96RR1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TWNKQ96RR1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TWNKQ96RR1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TWNKQ96RR1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TWNKQ96RR1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TWNKQ96RR1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TWNKQ96RR1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TWNKQ96RR1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TWNKQ96RR1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TWNKQ96RR1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TWNKQ96RR1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TWNKQ96RR1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TWNKQ96RR1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TWNKQ96RR1 AC098590.1-201ENST00000468126 897 ntBASIC21.08■□□□□ 0.97
TWNKQ96RR1 TFP1-202ENST00000475455 1573 ntBASIC21.08■□□□□ 0.97
TWNKQ96RR1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.08■□□□□ 0.97
TWNKQ96RR1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.08■□□□□ 0.97
TWNKQ96RR1 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.08■□□□□ 0.97
TWNKQ96RR1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TWNKQ96RR1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TWNKQ96RR1 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.08■□□□□ 0.97
TWNKQ96RR1 AL121829.2-201ENST00000620908 328 ntBASIC21.08■□□□□ 0.97
TWNKQ96RR1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.08■□□□□ 0.96
TWNKQ96RR1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TWNKQ96RR1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.08■□□□□ 0.96
TWNKQ96RR1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.08■□□□□ 0.96
TWNKQ96RR1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TWNKQ96RR1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TWNKQ96RR1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TWNKQ96RR1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TWNKQ96RR1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.07■□□□□ 0.96
TWNKQ96RR1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TWNKQ96RR1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TWNKQ96RR1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TWNKQ96RR1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TWNKQ96RR1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TWNKQ96RR1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.07■□□□□ 0.96
TWNKQ96RR1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.07■□□□□ 0.96
TWNKQ96RR1 RN7SL471P-201ENST00000580476 299 ntBASIC21.07■□□□□ 0.96
TWNKQ96RR1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TWNKQ96RR1 AL121906.2-201ENST00000621597 723 ntBASIC21.07■□□□□ 0.96
TWNKQ96RR1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.07■□□□□ 0.96
TWNKQ96RR1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TWNKQ96RR1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TWNKQ96RR1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.06■□□□□ 0.96
TWNKQ96RR1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.06■□□□□ 0.96
TWNKQ96RR1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.06■□□□□ 0.96
TWNKQ96RR1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TWNKQ96RR1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.06■□□□□ 0.96
TWNKQ96RR1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TWNKQ96RR1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.06■□□□□ 0.96
TWNKQ96RR1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TWNKQ96RR1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TWNKQ96RR1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TWNKQ96RR1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.06■□□□□ 0.96
TWNKQ96RR1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TWNKQ96RR1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.06■□□□□ 0.96
TWNKQ96RR1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.06■□□□□ 0.96
TWNKQ96RR1 AL023875.1-201ENST00000640777 796 ntBASIC21.06■□□□□ 0.96
TWNKQ96RR1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TWNKQ96RR1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TWNKQ96RR1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TWNKQ96RR1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TWNKQ96RR1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TWNKQ96RR1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TWNKQ96RR1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TWNKQ96RR1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms