Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH15Q96QU1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH15Q96QU1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH15Q96QU1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH15Q96QU1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH15Q96QU1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH15Q96QU1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH15Q96QU1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
PCDH15Q96QU1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH15Q96QU1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH15Q96QU1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH15Q96QU1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDH15Q96QU1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH15Q96QU1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDH15Q96QU1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH15Q96QU1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH15Q96QU1 INGX-201ENST00000359239 846 ntBASIC19.42■□□□□ 0.7
PCDH15Q96QU1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.42■□□□□ 0.7
PCDH15Q96QU1 HLA-G-202ENST00000376815 851 ntBASIC19.42■□□□□ 0.7
PCDH15Q96QU1 HLA-G-203ENST00000376818 1127 ntBASIC19.42■□□□□ 0.7
PCDH15Q96QU1 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDH15Q96QU1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH15Q96QU1 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.42■□□□□ 0.7
PCDH15Q96QU1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH15Q96QU1 AL049796.1-201ENST00000565336 1766 ntBASIC19.42■□□□□ 0.7
PCDH15Q96QU1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 CRYGFP-201ENST00000418459 633 ntBASIC19.41■□□□□ 0.7
PCDH15Q96QU1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 AC117947.1-201ENST00000427448 529 ntBASIC19.41■□□□□ 0.7
PCDH15Q96QU1 UPK3BP1-201ENST00000428678 509 ntBASIC19.41■□□□□ 0.7
PCDH15Q96QU1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 AC128688.1-201ENST00000487626 519 ntBASIC19.41■□□□□ 0.7
PCDH15Q96QU1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 EGLN1P1-201ENST00000531623 762 ntBASIC19.41■□□□□ 0.7
PCDH15Q96QU1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 AC097488.1-201ENST00000507834 756 ntBASIC19.41■□□□□ 0.7
PCDH15Q96QU1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH15Q96QU1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 AC004980.1-204ENST00000429707 299 ntBASIC19.4■□□□□ 0.7
PCDH15Q96QU1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 FAM87A-204ENST00000613235 858 ntBASIC19.4■□□□□ 0.7
PCDH15Q96QU1 AL358472.4-201ENST00000633140 710 ntBASIC19.4■□□□□ 0.7
PCDH15Q96QU1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH15Q96QU1 PLK5-205ENST00000642079 1969 ntBASIC19.4■□□□□ 0.7
PCDH15Q96QU1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
PCDH15Q96QU1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCDH15Q96QU1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms