Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
SLC47A1Q96FL8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC47A1Q96FL8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC47A1Q96FL8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 NTF6G-201ENST00000591094 616 ntBASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC47A1Q96FL8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 KRT18P61-201ENST00000585825 1298 ntBASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 UBE2DNL-204ENST00000602536 740 ntBASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 MIR6821-201ENST00000617625 74 ntBASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC47A1Q96FL8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 MYCNOS-205ENST00000641950 531 ntBASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 AC093503.3-201ENST00000624917 2352 ntBASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SLC47A1Q96FL8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SLC47A1Q96FL8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SLC47A1Q96FL8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.64■□□□□ 0.58
SLC47A1Q96FL8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC47A1Q96FL8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.64■□□□□ 0.58
SLC47A1Q96FL8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC47A1Q96FL8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 CDV3P1-201ENST00000471403 739 ntBASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SLC47A1Q96FL8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms