Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.25■□□□□ 0.83
RTP4Q96DX8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTP4Q96DX8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.25■□□□□ 0.83
RTP4Q96DX8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.25■□□□□ 0.83
RTP4Q96DX8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTP4Q96DX8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTP4Q96DX8 SLC29A4P1-201ENST00000398760 971 ntBASIC20.25■□□□□ 0.83
RTP4Q96DX8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RTP4Q96DX8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RTP4Q96DX8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.25■□□□□ 0.83
RTP4Q96DX8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.25■□□□□ 0.83
RTP4Q96DX8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.25■□□□□ 0.83
RTP4Q96DX8 AL138781.1-201ENST00000566567 1274 ntBASIC20.25■□□□□ 0.83
RTP4Q96DX8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.25■□□□□ 0.83
RTP4Q96DX8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.25■□□□□ 0.83
RTP4Q96DX8 MKRN4P-201ENST00000444706 1521 ntBASIC20.25■□□□□ 0.83
RTP4Q96DX8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTP4Q96DX8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTP4Q96DX8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.25■□□□□ 0.83
RTP4Q96DX8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTP4Q96DX8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.25■□□□□ 0.83
RTP4Q96DX8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTP4Q96DX8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.25■□□□□ 0.83
RTP4Q96DX8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.25■□□□□ 0.83
RTP4Q96DX8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTP4Q96DX8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTP4Q96DX8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTP4Q96DX8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTP4Q96DX8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTP4Q96DX8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.24■□□□□ 0.83
RTP4Q96DX8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.24■□□□□ 0.83
RTP4Q96DX8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.24■□□□□ 0.83
RTP4Q96DX8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.24■□□□□ 0.83
RTP4Q96DX8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RTP4Q96DX8 AC105036.2-201ENST00000569468 176 ntBASIC20.24■□□□□ 0.83
RTP4Q96DX8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.24■□□□□ 0.83
RTP4Q96DX8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RTP4Q96DX8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTP4Q96DX8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RTP4Q96DX8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.24■□□□□ 0.83
RTP4Q96DX8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.24■□□□□ 0.83
RTP4Q96DX8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTP4Q96DX8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTP4Q96DX8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTP4Q96DX8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTP4Q96DX8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTP4Q96DX8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTP4Q96DX8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTP4Q96DX8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTP4Q96DX8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
RTP4Q96DX8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTP4Q96DX8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.23■□□□□ 0.83
RTP4Q96DX8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RTP4Q96DX8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTP4Q96DX8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTP4Q96DX8 BX323043.1-201ENST00000641006 1765 ntBASIC20.23■□□□□ 0.83
RTP4Q96DX8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RTP4Q96DX8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTP4Q96DX8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTP4Q96DX8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RTP4Q96DX8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTP4Q96DX8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.22■□□□□ 0.83
RTP4Q96DX8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.22■□□□□ 0.83
RTP4Q96DX8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RTP4Q96DX8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTP4Q96DX8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTP4Q96DX8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTP4Q96DX8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTP4Q96DX8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTP4Q96DX8 AC073210.2-201ENST00000430369 194 ntBASIC20.22■□□□□ 0.83
RTP4Q96DX8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.22■□□□□ 0.83
RTP4Q96DX8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.22■□□□□ 0.83
RTP4Q96DX8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTP4Q96DX8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTP4Q96DX8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.22■□□□□ 0.83
RTP4Q96DX8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTP4Q96DX8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RTP4Q96DX8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTP4Q96DX8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RTP4Q96DX8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RTP4Q96DX8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.21■□□□□ 0.83
RTP4Q96DX8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RTP4Q96DX8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTP4Q96DX8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RTP4Q96DX8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTP4Q96DX8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTP4Q96DX8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RTP4Q96DX8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RTP4Q96DX8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.21■□□□□ 0.83
RTP4Q96DX8 BX276092.2-201ENST00000417668 665 ntBASIC20.21■□□□□ 0.83
RTP4Q96DX8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.21■□□□□ 0.83
RTP4Q96DX8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.21■□□□□ 0.83
RTP4Q96DX8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RTP4Q96DX8 KRT18P6-201ENST00000555540 1265 ntBASIC20.21■□□□□ 0.83
RTP4Q96DX8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.21■□□□□ 0.83
RTP4Q96DX8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.21■□□□□ 0.83
RTP4Q96DX8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTP4Q96DX8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
RTP4Q96DX8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTP4Q96DX8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms