Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC58Q96CX6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC58Q96CX6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC58Q96CX6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC58Q96CX6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRC58Q96CX6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.86■□□□□ 0.61
LRRC58Q96CX6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC58Q96CX6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.86■□□□□ 0.61
LRRC58Q96CX6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.86■□□□□ 0.61
LRRC58Q96CX6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC58Q96CX6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRC58Q96CX6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC58Q96CX6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC58Q96CX6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC58Q96CX6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LRRC58Q96CX6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC58Q96CX6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 LINC01465-201ENST00000408887 1940 ntBASIC18.85■□□□□ 0.61
LRRC58Q96CX6 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 AC120498.9-201ENST00000339021 3867 ntBASIC18.85■□□□□ 0.61
LRRC58Q96CX6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC58Q96CX6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 CYP21A1P-202ENST00000354927 1481 ntBASIC18.84■□□□□ 0.61
LRRC58Q96CX6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 AP001271.2-201ENST00000624018 1556 ntBASIC18.84■□□□□ 0.61
LRRC58Q96CX6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LRRC58Q96CX6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC58Q96CX6 KRT16P6-202ENST00000425692 1426 ntBASIC18.83■□□□□ 0.61
LRRC58Q96CX6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC58Q96CX6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.83■□□□□ 0.61
LRRC58Q96CX6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC58Q96CX6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.83■□□□□ 0.6
LRRC58Q96CX6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.83■□□□□ 0.6
LRRC58Q96CX6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.83■□□□□ 0.6
LRRC58Q96CX6 AC005837.3-201ENST00000612163 286 ntBASIC18.83■□□□□ 0.6
LRRC58Q96CX6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LRRC58Q96CX6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms