Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC25.57■■□□□ 1.68
ZNF428Q96B54 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC25.57■■□□□ 1.68
ZNF428Q96B54 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ZNF428Q96B54 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ZNF428Q96B54 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC25.57■■□□□ 1.68
ZNF428Q96B54 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ZNF428Q96B54 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
ZNF428Q96B54 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC25.57■■□□□ 1.68
ZNF428Q96B54 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ZNF428Q96B54 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ZNF428Q96B54 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC25.56■■□□□ 1.68
ZNF428Q96B54 PHGDH-210ENST00000641115 1638 ntBASIC25.56■■□□□ 1.68
ZNF428Q96B54 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZNF428Q96B54 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZNF428Q96B54 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
ZNF428Q96B54 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZNF428Q96B54 ABHD17AP6-201ENST00000458502 1044 ntBASIC25.56■■□□□ 1.68
ZNF428Q96B54 RNF121-214ENST00000533380 870 ntTSL 3 BASIC25.56■■□□□ 1.68
ZNF428Q96B54 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ZNF428Q96B54 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
ZNF428Q96B54 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZNF428Q96B54 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC25.56■■□□□ 1.68
ZNF428Q96B54 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZNF428Q96B54 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZNF428Q96B54 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF428Q96B54 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF428Q96B54 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC25.55■■□□□ 1.68
ZNF428Q96B54 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF428Q96B54 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF428Q96B54 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF428Q96B54 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF428Q96B54 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF428Q96B54 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF428Q96B54 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC25.55■■□□□ 1.68
ZNF428Q96B54 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF428Q96B54 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
ZNF428Q96B54 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
ZNF428Q96B54 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
ZNF428Q96B54 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.55■■□□□ 1.68
ZNF428Q96B54 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF428Q96B54 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF428Q96B54 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
ZNF428Q96B54 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC25.55■■□□□ 1.68
ZNF428Q96B54 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC25.55■■□□□ 1.68
ZNF428Q96B54 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF428Q96B54 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC25.55■■□□□ 1.68
ZNF428Q96B54 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF428Q96B54 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ZNF428Q96B54 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
ZNF428Q96B54 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZNF428Q96B54 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ZNF428Q96B54 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ZNF428Q96B54 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZNF428Q96B54 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC25.54■■□□□ 1.68
ZNF428Q96B54 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC25.54■■□□□ 1.68
ZNF428Q96B54 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ZNF428Q96B54 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC25.54■■□□□ 1.68
ZNF428Q96B54 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ZNF428Q96B54 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ZNF428Q96B54 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC25.54■■□□□ 1.68
ZNF428Q96B54 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.54■■□□□ 1.68
ZNF428Q96B54 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC25.54■■□□□ 1.68
ZNF428Q96B54 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
ZNF428Q96B54 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZNF428Q96B54 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
ZNF428Q96B54 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZNF428Q96B54 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZNF428Q96B54 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC25.53■■□□□ 1.68
ZNF428Q96B54 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZNF428Q96B54 AC120498.8-201ENST00000614275 531 ntBASIC25.53■■□□□ 1.68
ZNF428Q96B54 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ZNF428Q96B54 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
ZNF428Q96B54 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZNF428Q96B54 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ZNF428Q96B54 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ZNF428Q96B54 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ZNF428Q96B54 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.53■■□□□ 1.68
ZNF428Q96B54 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZNF428Q96B54 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ZNF428Q96B54 AC116351.2-201ENST00000606540 1585 ntBASIC25.52■■□□□ 1.68
ZNF428Q96B54 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ZNF428Q96B54 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC25.52■■□□□ 1.68
ZNF428Q96B54 UBE2SP1-201ENST00000450587 669 ntBASIC25.52■■□□□ 1.68
ZNF428Q96B54 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ZNF428Q96B54 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC25.52■■□□□ 1.68
ZNF428Q96B54 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC25.52■■□□□ 1.68
ZNF428Q96B54 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC25.52■■□□□ 1.68
ZNF428Q96B54 MTDHP1-201ENST00000605323 784 ntBASIC25.52■■□□□ 1.68
ZNF428Q96B54 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ZNF428Q96B54 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
ZNF428Q96B54 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ZNF428Q96B54 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ZNF428Q96B54 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
ZNF428Q96B54 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
ZNF428Q96B54 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
ZNF428Q96B54 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.67
ZNF428Q96B54 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ZNF428Q96B54 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
ZNF428Q96B54 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC25.51■■□□□ 1.67
ZNF428Q96B54 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms